Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tram1Q91V04 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tram1Q91V04 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tram1Q91V04 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.18□□□□□ -0.14
Tram1Q91V04 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Tram1Q91V04 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tram1Q91V04 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tram1Q91V04 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.18□□□□□ -0.14
Tram1Q91V04 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.18□□□□□ -0.14
Tram1Q91V04 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tram1Q91V04 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tram1Q91V04 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tram1Q91V04 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tram1Q91V04 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tram1Q91V04 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tram1Q91V04 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Tram1Q91V04 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tram1Q91V04 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tram1Q91V04 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tram1Q91V04 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tram1Q91V04 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tram1Q91V04 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tram1Q91V04 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tram1Q91V04 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tram1Q91V04 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tram1Q91V04 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tram1Q91V04 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tram1Q91V04 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Tram1Q91V04 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tram1Q91V04 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.17□□□□□ -0.14
Tram1Q91V04 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tram1Q91V04 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tram1Q91V04 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tram1Q91V04 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tram1Q91V04 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tram1Q91V04 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tram1Q91V04 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tram1Q91V04 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tram1Q91V04 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tram1Q91V04 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tram1Q91V04 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.17□□□□□ -0.14
Tram1Q91V04 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.17□□□□□ -0.14
Tram1Q91V04 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tram1Q91V04 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.17□□□□□ -0.14
Tram1Q91V04 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Tram1Q91V04 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tram1Q91V04 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tram1Q91V04 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tram1Q91V04 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tram1Q91V04 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tram1Q91V04 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Tram1Q91V04 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.16□□□□□ -0.14
Tram1Q91V04 Gm17661-201ENSMUST00000170317 270 ntBASIC14.16□□□□□ -0.14
Tram1Q91V04 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.16□□□□□ -0.14
Tram1Q91V04 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.16□□□□□ -0.14
Tram1Q91V04 AV356131-201ENSMUST00000206201 750 ntBASIC14.16□□□□□ -0.14
Tram1Q91V04 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.16□□□□□ -0.14
Tram1Q91V04 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Tram1Q91V04 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tram1Q91V04 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tram1Q91V04 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tram1Q91V04 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tram1Q91V04 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tram1Q91V04 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tram1Q91V04 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tram1Q91V04 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tram1Q91V04 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tram1Q91V04 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Tram1Q91V04 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tram1Q91V04 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tram1Q91V04 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tram1Q91V04 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tram1Q91V04 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tram1Q91V04 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Tram1Q91V04 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tram1Q91V04 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tram1Q91V04 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tram1Q91V04 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tram1Q91V04 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Tram1Q91V04 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tram1Q91V04 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tram1Q91V04 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tram1Q91V04 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tram1Q91V04 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tram1Q91V04 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tram1Q91V04 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tram1Q91V04 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Tram1Q91V04 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tram1Q91V04 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tram1Q91V04 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tram1Q91V04 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tram1Q91V04 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tram1Q91V04 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tram1Q91V04 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tram1Q91V04 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tram1Q91V04 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Tram1Q91V04 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tram1Q91V04 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tram1Q91V04 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tram1Q91V04 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms