Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Gm6433-201ENSMUST00000118634 875 ntBASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Gm7638-201ENSMUST00000121348 967 ntBASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf8Q8VC56 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf8Q8VC56 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf8Q8VC56 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf8Q8VC56 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf8Q8VC56 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf8Q8VC56 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf8Q8VC56 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Rnf8Q8VC56 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf8Q8VC56 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf8Q8VC56 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.83■□□□□ 0.12
Rnf8Q8VC56 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf8Q8VC56 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf8Q8VC56 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Rnf8Q8VC56 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Rnf8Q8VC56 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.83■□□□□ 0.12
Rnf8Q8VC56 Mir7071-201ENSMUST00000184847 69 ntBASIC15.83■□□□□ 0.12
Rnf8Q8VC56 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.83■□□□□ 0.12
Rnf8Q8VC56 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf8Q8VC56 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf8Q8VC56 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Rnf8Q8VC56 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Rnf8Q8VC56 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf8Q8VC56 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf8Q8VC56 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf8Q8VC56 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Rnf8Q8VC56 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf8Q8VC56 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf8Q8VC56 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf8Q8VC56 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf8Q8VC56 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Gm15565-201ENSMUST00000118890 427 ntBASIC15.82■□□□□ 0.12
Rnf8Q8VC56 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Gm9731-201ENSMUST00000209480 747 ntBASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf8Q8VC56 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
Rnf8Q8VC56 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.81■□□□□ 0.12
Rnf8Q8VC56 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf8Q8VC56 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.81■□□□□ 0.12
Rnf8Q8VC56 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.81■□□□□ 0.12
Rnf8Q8VC56 Gm17661-201ENSMUST00000170317 270 ntBASIC15.81■□□□□ 0.12
Rnf8Q8VC56 Il3ra-202ENSMUST00000223589 738 ntBASIC15.81■□□□□ 0.12
Rnf8Q8VC56 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf8Q8VC56 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf8Q8VC56 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf8Q8VC56 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf8Q8VC56 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf8Q8VC56 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Rnf8Q8VC56 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms