Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3kbp1Q8R550 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3kbp1Q8R550 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3kbp1Q8R550 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3kbp1Q8R550 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3kbp1Q8R550 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3kbp1Q8R550 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3kbp1Q8R550 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3kbp1Q8R550 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3kbp1Q8R550 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3kbp1Q8R550 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3kbp1Q8R550 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3kbp1Q8R550 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3kbp1Q8R550 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3kbp1Q8R550 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3kbp1Q8R550 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.91■□□□□ 0.3
Sh3kbp1Q8R550 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.91■□□□□ 0.3
Sh3kbp1Q8R550 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Sh3kbp1Q8R550 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3kbp1Q8R550 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3kbp1Q8R550 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3kbp1Q8R550 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3kbp1Q8R550 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Sh3kbp1Q8R550 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3kbp1Q8R550 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3kbp1Q8R550 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3kbp1Q8R550 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3kbp1Q8R550 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3kbp1Q8R550 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3kbp1Q8R550 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3kbp1Q8R550 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.91■□□□□ 0.3
Sh3kbp1Q8R550 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3kbp1Q8R550 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Gm7153-201ENSMUST00000117092 455 ntBASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Olfr129-201ENSMUST00000122318 993 ntBASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Gm45328-201ENSMUST00000210942 917 ntBASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3kbp1Q8R550 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Sh3kbp1Q8R550 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sh3kbp1Q8R550 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sh3kbp1Q8R550 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.89■□□□□ 0.3
Sh3kbp1Q8R550 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sh3kbp1Q8R550 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sh3kbp1Q8R550 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.89■□□□□ 0.29
Sh3kbp1Q8R550 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sh3kbp1Q8R550 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Sh3kbp1Q8R550 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sh3kbp1Q8R550 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sh3kbp1Q8R550 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.89■□□□□ 0.29
Sh3kbp1Q8R550 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sh3kbp1Q8R550 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sh3kbp1Q8R550 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Sh3kbp1Q8R550 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sh3kbp1Q8R550 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.89■□□□□ 0.29
Sh3kbp1Q8R550 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.88■□□□□ 0.29
Sh3kbp1Q8R550 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sh3kbp1Q8R550 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sh3kbp1Q8R550 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Sh3kbp1Q8R550 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Sh3kbp1Q8R550 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sh3kbp1Q8R550 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.88■□□□□ 0.29
Sh3kbp1Q8R550 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sh3kbp1Q8R550 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sh3kbp1Q8R550 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sh3kbp1Q8R550 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sh3kbp1Q8R550 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sh3kbp1Q8R550 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sh3kbp1Q8R550 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Sh3kbp1Q8R550 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Sh3kbp1Q8R550 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms