Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.69■□□□□ 0.58
Rtp1Q8C8C1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtp1Q8C8C1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtp1Q8C8C1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtp1Q8C8C1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtp1Q8C8C1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtp1Q8C8C1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Rtp1Q8C8C1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtp1Q8C8C1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtp1Q8C8C1 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.68■□□□□ 0.58
Rtp1Q8C8C1 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.68■□□□□ 0.58
Rtp1Q8C8C1 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtp1Q8C8C1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtp1Q8C8C1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtp1Q8C8C1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rtp1Q8C8C1 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.68■□□□□ 0.58
Rtp1Q8C8C1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtp1Q8C8C1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rtp1Q8C8C1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtp1Q8C8C1 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rtp1Q8C8C1 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Rtp1Q8C8C1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.67■□□□□ 0.58
Rtp1Q8C8C1 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtp1Q8C8C1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtp1Q8C8C1 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtp1Q8C8C1 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtp1Q8C8C1 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rtp1Q8C8C1 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtp1Q8C8C1 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtp1Q8C8C1 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.67■□□□□ 0.58
Rtp1Q8C8C1 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.67■□□□□ 0.58
Rtp1Q8C8C1 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtp1Q8C8C1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18.67■□□□□ 0.58
Rtp1Q8C8C1 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.67■□□□□ 0.58
Rtp1Q8C8C1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtp1Q8C8C1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtp1Q8C8C1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtp1Q8C8C1 Gm13127-201ENSMUST00000118978 1389 ntBASIC18.67■□□□□ 0.58
Rtp1Q8C8C1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.67■□□□□ 0.58
Rtp1Q8C8C1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtp1Q8C8C1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rtp1Q8C8C1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtp1Q8C8C1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rtp1Q8C8C1 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtp1Q8C8C1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.66■□□□□ 0.58
Rtp1Q8C8C1 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.66■□□□□ 0.58
Rtp1Q8C8C1 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.66■□□□□ 0.58
Rtp1Q8C8C1 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.66■□□□□ 0.58
Rtp1Q8C8C1 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtp1Q8C8C1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.66■□□□□ 0.58
Rtp1Q8C8C1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rtp1Q8C8C1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rtp1Q8C8C1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtp1Q8C8C1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtp1Q8C8C1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtp1Q8C8C1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rtp1Q8C8C1 Gm44872-201ENSMUST00000207864 420 ntBASIC18.65■□□□□ 0.58
Rtp1Q8C8C1 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtp1Q8C8C1 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtp1Q8C8C1 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rtp1Q8C8C1 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtp1Q8C8C1 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtp1Q8C8C1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rtp1Q8C8C1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtp1Q8C8C1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rtp1Q8C8C1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Rtp1Q8C8C1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtp1Q8C8C1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rtp1Q8C8C1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtp1Q8C8C1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rtp1Q8C8C1 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.64■□□□□ 0.57
Rtp1Q8C8C1 Gm27321-201ENSMUST00000185021 205 ntBASIC18.64■□□□□ 0.57
Rtp1Q8C8C1 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.64■□□□□ 0.57
Rtp1Q8C8C1 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rtp1Q8C8C1 Gm8655-201ENSMUST00000221159 852 ntBASIC18.64■□□□□ 0.57
Rtp1Q8C8C1 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtp1Q8C8C1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.64■□□□□ 0.57
Rtp1Q8C8C1 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.64■□□□□ 0.57
Rtp1Q8C8C1 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtp1Q8C8C1 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtp1Q8C8C1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Rtp1Q8C8C1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtp1Q8C8C1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtp1Q8C8C1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtp1Q8C8C1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtp1Q8C8C1 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Rtp1Q8C8C1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtp1Q8C8C1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtp1Q8C8C1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
Rtp1Q8C8C1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.63■□□□□ 0.57
Rtp1Q8C8C1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtp1Q8C8C1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rtp1Q8C8C1 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.63■□□□□ 0.57
Rtp1Q8C8C1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rtp1Q8C8C1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rtp1Q8C8C1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rtp1Q8C8C1 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.63■□□□□ 0.57
Rtp1Q8C8C1 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtp1Q8C8C1 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Rtp1Q8C8C1 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms