Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc5a7Q8BGY9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc5a7Q8BGY9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc5a7Q8BGY9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Slc5a7Q8BGY9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc5a7Q8BGY9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Slc5a7Q8BGY9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Slc5a7Q8BGY9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Slc5a7Q8BGY9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc5a7Q8BGY9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Slc5a7Q8BGY9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc5a7Q8BGY9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Slc5a7Q8BGY9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc5a7Q8BGY9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc5a7Q8BGY9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc5a7Q8BGY9 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc5a7Q8BGY9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Slc5a7Q8BGY9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc5a7Q8BGY9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc5a7Q8BGY9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc5a7Q8BGY9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Slc5a7Q8BGY9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.44□□□□□ -0.1
Slc5a7Q8BGY9 Gm18671-201ENSMUST00000214826 683 ntBASIC14.44□□□□□ -0.1
Slc5a7Q8BGY9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc5a7Q8BGY9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.44□□□□□ -0.1
Slc5a7Q8BGY9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc5a7Q8BGY9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Slc5a7Q8BGY9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc5a7Q8BGY9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc5a7Q8BGY9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc5a7Q8BGY9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc5a7Q8BGY9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc5a7Q8BGY9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc5a7Q8BGY9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc5a7Q8BGY9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc5a7Q8BGY9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc5a7Q8BGY9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc5a7Q8BGY9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Slc5a7Q8BGY9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc5a7Q8BGY9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc5a7Q8BGY9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc5a7Q8BGY9 Gm26524-201ENSMUST00000192339 390 ntBASIC14.43□□□□□ -0.1
Slc5a7Q8BGY9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc5a7Q8BGY9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc5a7Q8BGY9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc5a7Q8BGY9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc5a7Q8BGY9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Slc5a7Q8BGY9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc5a7Q8BGY9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc5a7Q8BGY9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc5a7Q8BGY9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Slc5a7Q8BGY9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc5a7Q8BGY9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc5a7Q8BGY9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc5a7Q8BGY9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc5a7Q8BGY9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Slc5a7Q8BGY9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc5a7Q8BGY9 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Slc5a7Q8BGY9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc5a7Q8BGY9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc5a7Q8BGY9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.42□□□□□ -0.1
Slc5a7Q8BGY9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.42□□□□□ -0.1
Slc5a7Q8BGY9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc5a7Q8BGY9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Slc5a7Q8BGY9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc5a7Q8BGY9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.42□□□□□ -0.1
Slc5a7Q8BGY9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc5a7Q8BGY9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Slc5a7Q8BGY9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc5a7Q8BGY9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc5a7Q8BGY9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Slc5a7Q8BGY9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Slc5a7Q8BGY9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slc5a7Q8BGY9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc5a7Q8BGY9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc5a7Q8BGY9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc5a7Q8BGY9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc5a7Q8BGY9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc5a7Q8BGY9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slc5a7Q8BGY9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slc5a7Q8BGY9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slc5a7Q8BGY9 Gm4974-201ENSMUST00000209974 875 ntBASIC14.41□□□□□ -0.1
Slc5a7Q8BGY9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slc5a7Q8BGY9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slc5a7Q8BGY9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc5a7Q8BGY9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slc5a7Q8BGY9 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.41□□□□□ -0.1
Slc5a7Q8BGY9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc5a7Q8BGY9 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc5a7Q8BGY9 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slc5a7Q8BGY9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc5a7Q8BGY9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc5a7Q8BGY9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc5a7Q8BGY9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc5a7Q8BGY9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Slc5a7Q8BGY9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Slc5a7Q8BGY9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc5a7Q8BGY9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc5a7Q8BGY9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc5a7Q8BGY9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms