Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gm6296-201ENSMUST00000222599 943 ntBASIC18.89■□□□□ 0.61
Prpf40bQ80W14 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf40bQ80W14 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Prpf40bQ80W14 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Prpf40bQ80W14 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf40bQ80W14 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf40bQ80W14 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf40bQ80W14 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf40bQ80W14 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf40bQ80W14 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf40bQ80W14 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf40bQ80W14 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf40bQ80W14 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf40bQ80W14 Gm5364-201ENSMUST00000216789 889 ntBASIC18.88■□□□□ 0.61
Prpf40bQ80W14 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf40bQ80W14 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf40bQ80W14 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf40bQ80W14 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf40bQ80W14 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Prpf40bQ80W14 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf40bQ80W14 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf40bQ80W14 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf40bQ80W14 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf40bQ80W14 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf40bQ80W14 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Prpf40bQ80W14 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Prpf40bQ80W14 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf40bQ80W14 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf40bQ80W14 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf40bQ80W14 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf40bQ80W14 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf40bQ80W14 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf40bQ80W14 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf40bQ80W14 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf40bQ80W14 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf40bQ80W14 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Prpf40bQ80W14 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf40bQ80W14 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.86■□□□□ 0.61
Prpf40bQ80W14 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf40bQ80W14 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.86■□□□□ 0.61
Prpf40bQ80W14 Gm11336-201ENSMUST00000118168 334 ntBASIC18.86■□□□□ 0.61
Prpf40bQ80W14 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.86■□□□□ 0.61
Prpf40bQ80W14 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.86■□□□□ 0.61
Prpf40bQ80W14 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.86■□□□□ 0.61
Prpf40bQ80W14 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.86■□□□□ 0.61
Prpf40bQ80W14 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.86■□□□□ 0.61
Prpf40bQ80W14 Gm5264-201ENSMUST00000190584 848 ntBASIC18.86■□□□□ 0.61
Prpf40bQ80W14 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.86■□□□□ 0.61
Prpf40bQ80W14 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf40bQ80W14 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Prpf40bQ80W14 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Prpf40bQ80W14 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.86■□□□□ 0.61
Prpf40bQ80W14 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf40bQ80W14 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Prpf40bQ80W14 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf40bQ80W14 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf40bQ80W14 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf40bQ80W14 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf40bQ80W14 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.85■□□□□ 0.61
Prpf40bQ80W14 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.85■□□□□ 0.61
Prpf40bQ80W14 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.85■□□□□ 0.61
Prpf40bQ80W14 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.85■□□□□ 0.61
Prpf40bQ80W14 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf40bQ80W14 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.85■□□□□ 0.61
Prpf40bQ80W14 Gm43575-201ENSMUST00000196420 516 ntBASIC18.85■□□□□ 0.61
Prpf40bQ80W14 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.85■□□□□ 0.61
Prpf40bQ80W14 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.85■□□□□ 0.61
Prpf40bQ80W14 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf40bQ80W14 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf40bQ80W14 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf40bQ80W14 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf40bQ80W14 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Prpf40bQ80W14 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.85■□□□□ 0.61
Prpf40bQ80W14 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf40bQ80W14 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Prpf40bQ80W14 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf40bQ80W14 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf40bQ80W14 Gm6736-201ENSMUST00000166583 948 ntBASIC18.84■□□□□ 0.61
Prpf40bQ80W14 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Prpf40bQ80W14 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf40bQ80W14 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.84■□□□□ 0.61
Prpf40bQ80W14 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf40bQ80W14 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Prpf40bQ80W14 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.84■□□□□ 0.61
Prpf40bQ80W14 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Prpf40bQ80W14 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Prpf40bQ80W14 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf40bQ80W14 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf40bQ80W14 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf40bQ80W14 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Prpf40bQ80W14 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.83■□□□□ 0.61
Prpf40bQ80W14 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Prpf40bQ80W14 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Prpf40bQ80W14 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Prpf40bQ80W14 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Prpf40bQ80W14 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Prpf40bQ80W14 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Prpf40bQ80W14 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Prpf40bQ80W14 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf40bQ80W14 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms