Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Casc1Q6TDU8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casc1Q6TDU8 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casc1Q6TDU8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casc1Q6TDU8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casc1Q6TDU8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.62■□□□□ 0.73
Casc1Q6TDU8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Casc1Q6TDU8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.62■□□□□ 0.73
Casc1Q6TDU8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casc1Q6TDU8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casc1Q6TDU8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casc1Q6TDU8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casc1Q6TDU8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casc1Q6TDU8 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casc1Q6TDU8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.62■□□□□ 0.73
Casc1Q6TDU8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casc1Q6TDU8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casc1Q6TDU8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casc1Q6TDU8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Casc1Q6TDU8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Casc1Q6TDU8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Casc1Q6TDU8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Casc1Q6TDU8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Casc1Q6TDU8 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.61■□□□□ 0.73
Casc1Q6TDU8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Casc1Q6TDU8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Casc1Q6TDU8 Gm2274-201ENSMUST00000184539 609 ntBASIC19.61■□□□□ 0.73
Casc1Q6TDU8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Casc1Q6TDU8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Casc1Q6TDU8 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.61■□□□□ 0.73
Casc1Q6TDU8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Casc1Q6TDU8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Casc1Q6TDU8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Casc1Q6TDU8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Casc1Q6TDU8 Gm44443-201ENSMUST00000204396 5633 ntBASIC19.61■□□□□ 0.73
Casc1Q6TDU8 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Casc1Q6TDU8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Casc1Q6TDU8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Casc1Q6TDU8 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Casc1Q6TDU8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Casc1Q6TDU8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Casc1Q6TDU8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Casc1Q6TDU8 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC19.6■□□□□ 0.73
Casc1Q6TDU8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Casc1Q6TDU8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Casc1Q6TDU8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.6■□□□□ 0.73
Casc1Q6TDU8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Casc1Q6TDU8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Casc1Q6TDU8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.6■□□□□ 0.73
Casc1Q6TDU8 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Casc1Q6TDU8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Casc1Q6TDU8 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.6■□□□□ 0.73
Casc1Q6TDU8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Casc1Q6TDU8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.6■□□□□ 0.73
Casc1Q6TDU8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Casc1Q6TDU8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Casc1Q6TDU8 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Casc1Q6TDU8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Casc1Q6TDU8 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Casc1Q6TDU8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Casc1Q6TDU8 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Casc1Q6TDU8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Casc1Q6TDU8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Casc1Q6TDU8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Casc1Q6TDU8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.59■□□□□ 0.73
Casc1Q6TDU8 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC19.59■□□□□ 0.73
Casc1Q6TDU8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Casc1Q6TDU8 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Casc1Q6TDU8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Casc1Q6TDU8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Casc1Q6TDU8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Casc1Q6TDU8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.59■□□□□ 0.73
Casc1Q6TDU8 Gm18959-201ENSMUST00000208954 655 ntBASIC19.59■□□□□ 0.73
Casc1Q6TDU8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.59■□□□□ 0.73
Casc1Q6TDU8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Casc1Q6TDU8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Casc1Q6TDU8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Casc1Q6TDU8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Casc1Q6TDU8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Casc1Q6TDU8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Casc1Q6TDU8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Casc1Q6TDU8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Casc1Q6TDU8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Casc1Q6TDU8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Casc1Q6TDU8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Casc1Q6TDU8 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Casc1Q6TDU8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Casc1Q6TDU8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Casc1Q6TDU8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Casc1Q6TDU8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Casc1Q6TDU8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.58■□□□□ 0.72
Casc1Q6TDU8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Casc1Q6TDU8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.72
Casc1Q6TDU8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Casc1Q6TDU8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Casc1Q6TDU8 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Casc1Q6TDU8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Casc1Q6TDU8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Casc1Q6TDU8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Casc1Q6TDU8 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms