Protein–RNA interactions for Protein: Q6P8X1

Snx6, Sorting nexin-6, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx6Q6P8X1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Snx6Q6P8X1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Snx6Q6P8X1 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Snx6Q6P8X1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Snx6Q6P8X1 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Snx6Q6P8X1 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Snx6Q6P8X1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx6Q6P8X1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Snx6Q6P8X1 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx6Q6P8X1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Snx6Q6P8X1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx6Q6P8X1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx6Q6P8X1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.69■□□□□ 0.1
Snx6Q6P8X1 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Snx6Q6P8X1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.69■□□□□ 0.1
Snx6Q6P8X1 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx6Q6P8X1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Snx6Q6P8X1 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.69■□□□□ 0.1
Snx6Q6P8X1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx6Q6P8X1 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Snx6Q6P8X1 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.69■□□□□ 0.1
Snx6Q6P8X1 Gm7213-201ENSMUST00000215977 950 ntBASIC15.69■□□□□ 0.1
Snx6Q6P8X1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx6Q6P8X1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx6Q6P8X1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx6Q6P8X1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx6Q6P8X1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Snx6Q6P8X1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx6Q6P8X1 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx6Q6P8X1 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx6Q6P8X1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx6Q6P8X1 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx6Q6P8X1 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx6Q6P8X1 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx6Q6P8X1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Actl10-202ENSMUST00000226583 1501 ntBASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Gm18959-201ENSMUST00000208954 655 ntBASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx6Q6P8X1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Snx6Q6P8X1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Mir5130-201ENSMUST00000175160 84 ntBASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Gm43799-201ENSMUST00000201845 579 ntBASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Gm10252-201ENSMUST00000209541 832 ntBASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Phf7-203ENSMUST00000226565 1971 ntBASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snx6Q6P8X1 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms