Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SUMO3P55854 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SUMO3P55854 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SUMO3P55854 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.44■□□□□ 0.38
SUMO3P55854 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.44■□□□□ 0.38
SUMO3P55854 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.44■□□□□ 0.38
SUMO3P55854 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.44■□□□□ 0.38
SUMO3P55854 MIR6786-201ENST00000616843 113 ntBASIC17.44■□□□□ 0.38
SUMO3P55854 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SUMO3P55854 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SUMO3P55854 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SUMO3P55854 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SUMO3P55854 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.44■□□□□ 0.38
SUMO3P55854 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SUMO3P55854 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SUMO3P55854 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SUMO3P55854 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SUMO3P55854 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SUMO3P55854 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.43■□□□□ 0.38
SUMO3P55854 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SUMO3P55854 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.43■□□□□ 0.38
SUMO3P55854 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.43■□□□□ 0.38
SUMO3P55854 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SUMO3P55854 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SUMO3P55854 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SUMO3P55854 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SUMO3P55854 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SUMO3P55854 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SUMO3P55854 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SUMO3P55854 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SUMO3P55854 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SUMO3P55854 TSPY23P-201ENST00000440136 739 ntBASIC17.43■□□□□ 0.38
SUMO3P55854 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SUMO3P55854 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.43■□□□□ 0.38
SUMO3P55854 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SUMO3P55854 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.43■□□□□ 0.38
SUMO3P55854 DGCR10-201ENST00000609839 495 ntBASIC17.43■□□□□ 0.38
SUMO3P55854 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.43■□□□□ 0.38
SUMO3P55854 AC011298.2-201ENST00000617989 482 ntBASIC17.43■□□□□ 0.38
SUMO3P55854 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SUMO3P55854 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SUMO3P55854 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.43■□□□□ 0.38
SUMO3P55854 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SUMO3P55854 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SUMO3P55854 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.42■□□□□ 0.38
SUMO3P55854 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SUMO3P55854 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SUMO3P55854 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SUMO3P55854 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SUMO3P55854 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SUMO3P55854 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SUMO3P55854 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SUMO3P55854 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SUMO3P55854 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SUMO3P55854 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SUMO3P55854 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SUMO3P55854 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SUMO3P55854 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SUMO3P55854 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SUMO3P55854 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SUMO3P55854 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.42■□□□□ 0.38
SUMO3P55854 B3GAT3P1-201ENST00000471720 806 ntBASIC17.42■□□□□ 0.38
SUMO3P55854 AC091390.4-202ENST00000476426 537 ntBASIC17.42■□□□□ 0.38
SUMO3P55854 AC116562.2-201ENST00000507042 360 ntBASIC17.42■□□□□ 0.38
SUMO3P55854 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.42■□□□□ 0.38
SUMO3P55854 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.42■□□□□ 0.38
SUMO3P55854 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.42■□□□□ 0.38
SUMO3P55854 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.42■□□□□ 0.38
SUMO3P55854 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SUMO3P55854 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SUMO3P55854 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SUMO3P55854 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
SUMO3P55854 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SUMO3P55854 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SUMO3P55854 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SUMO3P55854 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SUMO3P55854 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SUMO3P55854 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SUMO3P55854 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SUMO3P55854 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SUMO3P55854 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SUMO3P55854 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.41■□□□□ 0.38
SUMO3P55854 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SUMO3P55854 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SUMO3P55854 MIR4785-201ENST00000585005 73 ntBASIC17.41■□□□□ 0.38
SUMO3P55854 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SUMO3P55854 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.41■□□□□ 0.38
SUMO3P55854 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SUMO3P55854 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.41■□□□□ 0.38
SUMO3P55854 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SUMO3P55854 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.41■□□□□ 0.38
SUMO3P55854 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SUMO3P55854 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.41■□□□□ 0.38
SUMO3P55854 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.41■□□□□ 0.38
SUMO3P55854 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SUMO3P55854 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.4■□□□□ 0.38
SUMO3P55854 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SUMO3P55854 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.4■□□□□ 0.38
SUMO3P55854 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SUMO3P55854 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms