Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nkx2-1P50220 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nkx2-1P50220 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Nkx2-1P50220 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Nkx2-1P50220 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-1P50220 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-1P50220 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-1P50220 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-1P50220 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nkx2-1P50220 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-1P50220 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nkx2-1P50220 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-1P50220 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-1P50220 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.66□□□□□ -0.22
Nkx2-1P50220 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-1P50220 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nkx2-1P50220 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-1P50220 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-1P50220 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-1P50220 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-1P50220 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-1P50220 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Nkx2-1P50220 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-1P50220 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.66□□□□□ -0.22
Nkx2-1P50220 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-1P50220 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.66□□□□□ -0.22
Nkx2-1P50220 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-1P50220 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Nkx2-1P50220 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.66□□□□□ -0.22
Nkx2-1P50220 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-1P50220 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-1P50220 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-1P50220 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-1P50220 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-1P50220 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-1P50220 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Nkx2-1P50220 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-1P50220 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.65□□□□□ -0.22
Nkx2-1P50220 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-1P50220 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nkx2-1P50220 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nkx2-1P50220 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-1P50220 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-1P50220 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.65□□□□□ -0.22
Nkx2-1P50220 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-1P50220 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.65□□□□□ -0.22
Nkx2-1P50220 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Nkx2-1P50220 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nkx2-1P50220 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-1P50220 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-1P50220 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.65□□□□□ -0.22
Nkx2-1P50220 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-1P50220 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.65□□□□□ -0.22
Nkx2-1P50220 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Nkx2-1P50220 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.64□□□□□ -0.23
Nkx2-1P50220 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-1P50220 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-1P50220 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-1P50220 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-1P50220 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-1P50220 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-1P50220 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Nkx2-1P50220 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.64□□□□□ -0.23
Nkx2-1P50220 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-1P50220 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.64□□□□□ -0.23
Nkx2-1P50220 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Nkx2-1P50220 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-1P50220 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-1P50220 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-1P50220 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-1P50220 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-1P50220 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.64□□□□□ -0.23
Nkx2-1P50220 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-1P50220 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.64□□□□□ -0.23
Nkx2-1P50220 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-1P50220 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-1P50220 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-1P50220 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-1P50220 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-1P50220 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-1P50220 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-1P50220 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-1P50220 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-1P50220 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-1P50220 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-1P50220 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Nkx2-1P50220 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-1P50220 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-1P50220 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Nkx2-1P50220 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Nkx2-1P50220 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-1P50220 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-1P50220 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-1P50220 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-1P50220 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-1P50220 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.63□□□□□ -0.23
Nkx2-1P50220 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.63□□□□□ -0.23
Nkx2-1P50220 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-1P50220 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Nkx2-1P50220 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms