Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Hist1h1aP43275 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.58□□□□□ -0.24
Hist1h1aP43275 Gm12527-201ENSMUST00000117967 564 ntBASIC13.58□□□□□ -0.24
Hist1h1aP43275 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.58□□□□□ -0.24
Hist1h1aP43275 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Hist1h1aP43275 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hist1h1aP43275 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Hist1h1aP43275 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hist1h1aP43275 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hist1h1aP43275 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hist1h1aP43275 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hist1h1aP43275 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.58□□□□□ -0.24
Hist1h1aP43275 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hist1h1aP43275 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Hist1h1aP43275 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hist1h1aP43275 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.58□□□□□ -0.24
Hist1h1aP43275 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hist1h1aP43275 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Hist1h1aP43275 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hist1h1aP43275 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.57□□□□□ -0.24
Hist1h1aP43275 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hist1h1aP43275 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hist1h1aP43275 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Hist1h1aP43275 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hist1h1aP43275 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hist1h1aP43275 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hist1h1aP43275 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hist1h1aP43275 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hist1h1aP43275 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hist1h1aP43275 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Hist1h1aP43275 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hist1h1aP43275 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hist1h1aP43275 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hist1h1aP43275 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Hist1h1aP43275 Gm5643-201ENSMUST00000117081 966 ntBASIC13.56□□□□□ -0.24
Hist1h1aP43275 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Hist1h1aP43275 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hist1h1aP43275 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hist1h1aP43275 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hist1h1aP43275 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hist1h1aP43275 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hist1h1aP43275 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hist1h1aP43275 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Hist1h1aP43275 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hist1h1aP43275 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hist1h1aP43275 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hist1h1aP43275 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hist1h1aP43275 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hist1h1aP43275 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.56□□□□□ -0.24
Hist1h1aP43275 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hist1h1aP43275 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hist1h1aP43275 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hist1h1aP43275 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hist1h1aP43275 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hist1h1aP43275 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.55□□□□□ -0.24
Hist1h1aP43275 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Hist1h1aP43275 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.55□□□□□ -0.24
Hist1h1aP43275 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.55□□□□□ -0.24
Hist1h1aP43275 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hist1h1aP43275 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hist1h1aP43275 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.55□□□□□ -0.24
Hist1h1aP43275 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.55□□□□□ -0.24
Hist1h1aP43275 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.55□□□□□ -0.24
Hist1h1aP43275 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hist1h1aP43275 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.55□□□□□ -0.24
Hist1h1aP43275 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.55□□□□□ -0.24
Hist1h1aP43275 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hist1h1aP43275 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hist1h1aP43275 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hist1h1aP43275 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms