Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Cntn1P12960 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Cntn1P12960 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cntn1P12960 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cntn1P12960 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cntn1P12960 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Cntn1P12960 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Cntn1P12960 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cntn1P12960 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cntn1P12960 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cntn1P12960 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Cntn1P12960 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cntn1P12960 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cntn1P12960 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.72■□□□□ 0.11
Cntn1P12960 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cntn1P12960 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cntn1P12960 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cntn1P12960 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cntn1P12960 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Cntn1P12960 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.72■□□□□ 0.11
Cntn1P12960 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cntn1P12960 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Cntn1P12960 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.72■□□□□ 0.11
Cntn1P12960 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Cntn1P12960 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cntn1P12960 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cntn1P12960 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cntn1P12960 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cntn1P12960 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cntn1P12960 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.72■□□□□ 0.11
Cntn1P12960 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cntn1P12960 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cntn1P12960 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cntn1P12960 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cntn1P12960 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Cntn1P12960 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cntn1P12960 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cntn1P12960 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cntn1P12960 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.71■□□□□ 0.11
Cntn1P12960 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cntn1P12960 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cntn1P12960 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Cntn1P12960 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.71■□□□□ 0.11
Cntn1P12960 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Cntn1P12960 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cntn1P12960 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cntn1P12960 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.71■□□□□ 0.11
Cntn1P12960 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cntn1P12960 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cntn1P12960 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cntn1P12960 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cntn1P12960 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cntn1P12960 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Cntn1P12960 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cntn1P12960 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cntn1P12960 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cntn1P12960 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Cntn1P12960 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cntn1P12960 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cntn1P12960 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cntn1P12960 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cntn1P12960 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cntn1P12960 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cntn1P12960 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cntn1P12960 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.7■□□□□ 0.1
Cntn1P12960 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.7■□□□□ 0.1
Cntn1P12960 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.7■□□□□ 0.1
Cntn1P12960 Gm10052-201ENSMUST00000168019 960 ntBASIC15.7■□□□□ 0.1
Cntn1P12960 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.7■□□□□ 0.1
Cntn1P12960 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Cntn1P12960 Gm7729-201ENSMUST00000050143 801 ntBASIC15.7■□□□□ 0.1
Cntn1P12960 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cntn1P12960 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cntn1P12960 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.7■□□□□ 0.1
Cntn1P12960 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cntn1P12960 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cntn1P12960 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cntn1P12960 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cntn1P12960 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cntn1P12960 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cntn1P12960 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
Cntn1P12960 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cntn1P12960 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cntn1P12960 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.69■□□□□ 0.1
Cntn1P12960 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cntn1P12960 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.69■□□□□ 0.1
Cntn1P12960 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.69■□□□□ 0.1
Cntn1P12960 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cntn1P12960 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cntn1P12960 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cntn1P12960 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cntn1P12960 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cntn1P12960 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cntn1P12960 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cntn1P12960 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cntn1P12960 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cntn1P12960 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cntn1P12960 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cntn1P12960 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cntn1P12960 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms