Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdh17E9PXF0 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.26■□□□□ 0.03
Pcdh17E9PXF0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh17E9PXF0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh17E9PXF0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh17E9PXF0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh17E9PXF0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pcdh17E9PXF0 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh17E9PXF0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh17E9PXF0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Pcdh17E9PXF0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh17E9PXF0 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdh17E9PXF0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdh17E9PXF0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh17E9PXF0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh17E9PXF0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdh17E9PXF0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh17E9PXF0 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh17E9PXF0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh17E9PXF0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdh17E9PXF0 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.25■□□□□ 0.03
Pcdh17E9PXF0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh17E9PXF0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh17E9PXF0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh17E9PXF0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh17E9PXF0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh17E9PXF0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Pcdh17E9PXF0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh17E9PXF0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdh17E9PXF0 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.24■□□□□ 0.03
Pcdh17E9PXF0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh17E9PXF0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh17E9PXF0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh17E9PXF0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdh17E9PXF0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh17E9PXF0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh17E9PXF0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh17E9PXF0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
Pcdh17E9PXF0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.24■□□□□ 0.03
Pcdh17E9PXF0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.24■□□□□ 0.03
Pcdh17E9PXF0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh17E9PXF0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh17E9PXF0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh17E9PXF0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh17E9PXF0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.24■□□□□ 0.03
Pcdh17E9PXF0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh17E9PXF0 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.24■□□□□ 0.03
Pcdh17E9PXF0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdh17E9PXF0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh17E9PXF0 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh17E9PXF0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh17E9PXF0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh17E9PXF0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh17E9PXF0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh17E9PXF0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh17E9PXF0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh17E9PXF0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh17E9PXF0 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pcdh17E9PXF0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdh17E9PXF0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdh17E9PXF0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdh17E9PXF0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdh17E9PXF0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pcdh17E9PXF0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh17E9PXF0 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.23■□□□□ 0.03
Pcdh17E9PXF0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh17E9PXF0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh17E9PXF0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh17E9PXF0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh17E9PXF0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh17E9PXF0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh17E9PXF0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh17E9PXF0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh17E9PXF0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh17E9PXF0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh17E9PXF0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pcdh17E9PXF0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh17E9PXF0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh17E9PXF0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdh17E9PXF0 Gm27459-201ENSMUST00000184860 107 ntBASIC15.22■□□□□ 0.03
Pcdh17E9PXF0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh17E9PXF0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh17E9PXF0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh17E9PXF0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh17E9PXF0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdh17E9PXF0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pcdh17E9PXF0 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh17E9PXF0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh17E9PXF0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdh17E9PXF0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh17E9PXF0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh17E9PXF0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdh17E9PXF0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.21■□□□□ 0.03
Pcdh17E9PXF0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh17E9PXF0 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh17E9PXF0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh17E9PXF0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh17E9PXF0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh17E9PXF0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh17E9PXF0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms