Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-4A0A0G2JG01 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-4A0A0G2JG01 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-4A0A0G2JG01 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-4A0A0G2JG01 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-4A0A0G2JG01 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-4A0A0G2JG01 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.34□□□□□ -0.27
Trav13n-4A0A0G2JG01 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav13n-4A0A0G2JG01 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-4A0A0G2JG01 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-4A0A0G2JG01 Gm13216-201ENSMUST00000117145 591 ntBASIC13.34□□□□□ -0.27
Trav13n-4A0A0G2JG01 Gm7284-201ENSMUST00000131667 944 ntBASIC13.34□□□□□ -0.27
Trav13n-4A0A0G2JG01 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav13n-4A0A0G2JG01 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.34□□□□□ -0.27
Trav13n-4A0A0G2JG01 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav13n-4A0A0G2JG01 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-4A0A0G2JG01 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-4A0A0G2JG01 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-4A0A0G2JG01 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-4A0A0G2JG01 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-4A0A0G2JG01 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-4A0A0G2JG01 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav13n-4A0A0G2JG01 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-4A0A0G2JG01 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav13n-4A0A0G2JG01 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-4A0A0G2JG01 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav13n-4A0A0G2JG01 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav13n-4A0A0G2JG01 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav13n-4A0A0G2JG01 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav13n-4A0A0G2JG01 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav13n-4A0A0G2JG01 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-4A0A0G2JG01 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav13n-4A0A0G2JG01 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav13n-4A0A0G2JG01 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav13n-4A0A0G2JG01 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav13n-4A0A0G2JG01 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-4A0A0G2JG01 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-4A0A0G2JG01 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-4A0A0G2JG01 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trav13n-4A0A0G2JG01 Gm9103-201ENSMUST00000119371 405 ntBASIC13.33□□□□□ -0.28
Trav13n-4A0A0G2JG01 Gm13474-201ENSMUST00000122466 815 ntBASIC13.33□□□□□ -0.28
Trav13n-4A0A0G2JG01 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav13n-4A0A0G2JG01 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-4A0A0G2JG01 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-4A0A0G2JG01 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-4A0A0G2JG01 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.33□□□□□ -0.28
Trav13n-4A0A0G2JG01 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-4A0A0G2JG01 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav13n-4A0A0G2JG01 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav13n-4A0A0G2JG01 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav13n-4A0A0G2JG01 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-4A0A0G2JG01 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav13n-4A0A0G2JG01 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-4A0A0G2JG01 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-4A0A0G2JG01 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Gm27389-201ENSMUST00000183622 195 ntBASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms