Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Gm43352-201ENSMUST00000196419 3065 ntBASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Gm42473-201ENSMUST00000201056 2291 ntBASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Gm37736-201ENSMUST00000193564 2802 ntBASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Igkv8-27A0A0G2JF28 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Gm8493-201ENSMUST00000196881 489 ntBASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Gm42901-201ENSMUST00000197735 3171 ntBASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC10.33□□□□□ -0.76
Igkv8-27A0A0G2JF28 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Igkv8-27A0A0G2JF28 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-27A0A0G2JF28 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-27A0A0G2JF28 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-27A0A0G2JF28 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-27A0A0G2JF28 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC10.32□□□□□ -0.76
Igkv8-27A0A0G2JF28 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-27A0A0G2JF28 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
Igkv8-27A0A0G2JF28 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-27A0A0G2JF28 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-27A0A0G2JF28 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-27A0A0G2JF28 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC10.32□□□□□ -0.76
Igkv8-27A0A0G2JF28 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms