Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Gm2011-201ENSMUST00000203124 1263 ntBASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.84□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Gm10138-203ENSMUST00000206952 366 ntBASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.83□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.82□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Gm17661-201ENSMUST00000170317 270 ntBASIC12.82□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC12.82□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Gm5408-201ENSMUST00000197998 747 ntBASIC12.82□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-3A0A0B4J1H2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms