Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav10A0A075B642 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav10A0A075B642 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav10A0A075B642 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Trav10A0A075B642 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav10A0A075B642 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav10A0A075B642 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav10A0A075B642 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav10A0A075B642 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav10A0A075B642 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav10A0A075B642 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav10A0A075B642 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav10A0A075B642 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav10A0A075B642 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav10A0A075B642 Gm22697-201ENSMUST00000175194 63 ntBASIC14.59□□□□□ -0.07
Trav10A0A075B642 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.59□□□□□ -0.07
Trav10A0A075B642 Gm18115-201ENSMUST00000221209 621 ntBASIC14.59□□□□□ -0.07
Trav10A0A075B642 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav10A0A075B642 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav10A0A075B642 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
Trav10A0A075B642 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav10A0A075B642 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav10A0A075B642 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Trav10A0A075B642 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav10A0A075B642 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav10A0A075B642 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav10A0A075B642 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav10A0A075B642 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav10A0A075B642 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav10A0A075B642 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav10A0A075B642 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav10A0A075B642 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav10A0A075B642 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav10A0A075B642 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav10A0A075B642 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav10A0A075B642 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav10A0A075B642 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav10A0A075B642 Gm11336-201ENSMUST00000118168 334 ntBASIC14.58□□□□□ -0.08
Trav10A0A075B642 Mir7071-201ENSMUST00000184847 69 ntBASIC14.58□□□□□ -0.08
Trav10A0A075B642 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Trav10A0A075B642 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav10A0A075B642 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav10A0A075B642 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav10A0A075B642 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav10A0A075B642 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav10A0A075B642 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav10A0A075B642 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav10A0A075B642 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav10A0A075B642 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav10A0A075B642 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav10A0A075B642 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav10A0A075B642 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav10A0A075B642 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.58□□□□□ -0.08
Trav10A0A075B642 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav10A0A075B642 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav10A0A075B642 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav10A0A075B642 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav10A0A075B642 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav10A0A075B642 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav10A0A075B642 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav10A0A075B642 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav10A0A075B642 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav10A0A075B642 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trav10A0A075B642 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav10A0A075B642 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav10A0A075B642 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.57□□□□□ -0.08
Trav10A0A075B642 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav10A0A075B642 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav10A0A075B642 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav10A0A075B642 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav10A0A075B642 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav10A0A075B642 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.57□□□□□ -0.08
Trav10A0A075B642 Gm27389-201ENSMUST00000183622 195 ntBASIC14.57□□□□□ -0.08
Trav10A0A075B642 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.57□□□□□ -0.08
Trav10A0A075B642 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.57□□□□□ -0.08
Trav10A0A075B642 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav10A0A075B642 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav10A0A075B642 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav10A0A075B642 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav10A0A075B642 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav10A0A075B642 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav10A0A075B642 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav10A0A075B642 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav10A0A075B642 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Trav10A0A075B642 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav10A0A075B642 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav10A0A075B642 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav10A0A075B642 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav10A0A075B642 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav10A0A075B642 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav10A0A075B642 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav10A0A075B642 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav10A0A075B642 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav10A0A075B642 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
Trav10A0A075B642 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav10A0A075B642 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.56□□□□□ -0.08
Trav10A0A075B642 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav10A0A075B642 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav10A0A075B642 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav10A0A075B642 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms