Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 RNU1-115P-201ENST00000365329 160 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 SNORA63.7-201ENST00000365579 123 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 Y_RNA.594-201ENST00000410373 140 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 RNA5SP111-201ENST00000411386 101 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 AC099336.2-201ENST00000422457 254 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 MED28P3-201ENST00000444288 531 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 AC010655.1-201ENST00000449336 292 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 GSTA11P-201ENST00000452866 669 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 AC099560.2-201ENST00000457554 255 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 RN7SL552P-201ENST00000462094 276 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 PPIAP21-201ENST00000464473 501 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 AC026801.1-201ENST00000497178 464 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 AC090958.1-201ENST00000511122 351 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 Y_RNA.670-201ENST00000516255 105 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 Y_RNA.710-201ENST00000516975 110 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 RNU6-699P-201ENST00000517081 110 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 AC105031.1-201ENST00000518550 476 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 OR8R1P-201ENST00000543943 764 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 AC079600.1-201ENST00000550326 297 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 AC113195.1-201ENST00000579952 141 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 AC012368.3-201ENST00000604190 219 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 AL031176.1-201ENST00000604554 466 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 AL121612.2-201ENST00000612261 482 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 AL118522.2-201ENST00000616045 615 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 AC010325.3-201ENST00000641084 394 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 DNM1P47-203ENST00000571780 12667 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 AL158163.1-201ENST00000603915 1649 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 CDC27P3-201ENST00000635418 1910 ntBASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 AC022164.1-201ENST00000568767 2673 ntBASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 Y_RNA.389-201ENST00000383924 113 ntBASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 RNU1-74P-201ENST00000384108 171 ntBASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 RNU2-47P-201ENST00000410649 186 ntBASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 RNU2-18P-201ENST00000411224 162 ntBASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 AC015977.1-201ENST00000418887 292 ntBASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 Z82198.3-201ENST00000421145 199 ntBASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 OR3D1P-201ENST00000438288 955 ntBASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 CYCSP24-201ENST00000445119 316 ntBASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 RN7SL352P-201ENST00000466002 277 ntBASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 AC104472.2-201ENST00000469035 601 ntBASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 MTCO3P44-201ENST00000510977 541 ntBASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 RNU6-1332P-201ENST00000516666 104 ntBASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 CR383656.7-201ENST00000548164 174 ntBASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 AP001823.1-201ENST00000604056 1003 ntBASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 AC008555.7-201ENST00000605008 583 ntBASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 AC006329.2-201ENST00000611491 394 ntBASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 AL732372.2-225ENST00000642124 456 ntBASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDHGA11Q9Y5H2 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms