Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.79□□□□□ -1.8
SATB2Q9UPW6 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.79□□□□□ -1.8
SATB2Q9UPW6 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.79□□□□□ -1.8
SATB2Q9UPW6 TPTE2P3-201ENST00000441562 1189 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 HMGB3P6-201ENST00000444896 598 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AL606517.1-201ENST00000446914 387 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AC104978.1-201ENST00000449387 391 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.79□□□□□ -1.8
SATB2Q9UPW6 NF1P3-201ENST00000457709 450 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 RPL21P103-201ENST00000479921 488 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 RPS3AP6-201ENST00000484430 795 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AC010342.1-201ENST00000514047 877 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 MTCO1P30-201ENST00000515244 580 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 RNA5SP135-201ENST00000517019 125 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.79□□□□□ -1.8
SATB2Q9UPW6 IGKV2D-19-201ENST00000523346 262 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AP001207.1-201ENST00000524051 481 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 OR7E13P-201ENST00000526052 910 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 OR5D17P-201ENST00000531492 978 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.79□□□□□ -1.8
SATB2Q9UPW6 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.79□□□□□ -1.8
SATB2Q9UPW6 GTF2IP22-201ENST00000554443 182 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AC022968.1-201ENST00000567372 442 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AC006270.2-201ENST00000578523 652 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AC022069.1-201ENST00000582910 658 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 MTCO2P2-201ENST00000591258 225 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.79□□□□□ -1.8
SATB2Q9UPW6 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.79□□□□□ -1.8
SATB2Q9UPW6 RNU4-5P-201ENST00000607255 135 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AC128687.2-201ENST00000609657 566 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AC105429.2-201ENST00000610567 517 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AL592295.2-201ENST00000612578 206 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AL121895.2-201ENST00000619558 447 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AC091046.2-201ENST00000620775 665 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AC023510.2-201ENST00000622162 746 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AC138649.5-201ENST00000637456 137 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 MFSD8-245ENST00000641743 948 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 ZNF663P-202ENST00000641770 1131 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.79□□□□□ -1.8
SATB2Q9UPW6 BDP1P-201ENST00000582658 1990 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AL133383.2-201ENST00000622958 2336 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 MFSD8-236ENST00000641509 4050 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 AC091152.2-201ENST00000591628 2569 ntBASIC3.79□□□□□ -1.8
SATB2Q9UPW6 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SATB2Q9UPW6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
SATB2Q9UPW6 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.78□□□□□ -1.8
SATB2Q9UPW6 ZNF33CP-201ENST00000432492 2030 ntBASIC3.78□□□□□ -1.8
SATB2Q9UPW6 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SATB2Q9UPW6 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SATB2Q9UPW6 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SATB2Q9UPW6 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
SATB2Q9UPW6 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
SATB2Q9UPW6 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SATB2Q9UPW6 RNU6-839P-201ENST00000363347 108 ntBASIC3.78□□□□□ -1.8
SATB2Q9UPW6 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SATB2Q9UPW6 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
SATB2Q9UPW6 RNU6-444P-201ENST00000383988 108 ntBASIC3.78□□□□□ -1.8
SATB2Q9UPW6 Y_RNA.472-201ENST00000384322 102 ntBASIC3.78□□□□□ -1.8
SATB2Q9UPW6 SNORD116-12-201ENST00000384468 92 ntBASIC3.78□□□□□ -1.8
SATB2Q9UPW6 MIR217-201ENST00000384817 110 ntBASIC3.78□□□□□ -1.8
SATB2Q9UPW6 MIR34B-201ENST00000385076 84 ntBASIC3.78□□□□□ -1.8
SATB2Q9UPW6 TMSB4XP8-201ENST00000402089 135 ntBASIC3.78□□□□□ -1.8
SATB2Q9UPW6 TMSB4XP6-201ENST00000415187 135 ntBASIC3.78□□□□□ -1.8
SATB2Q9UPW6 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.78□□□□□ -1.8
SATB2Q9UPW6 TMSB4XP1-201ENST00000424567 135 ntBASIC3.78□□□□□ -1.8
SATB2Q9UPW6 RPP40P1-201ENST00000426762 456 ntBASIC3.78□□□□□ -1.8
SATB2Q9UPW6 RPL36P19-201ENST00000430744 301 ntBASIC3.78□□□□□ -1.8
SATB2Q9UPW6 AC112492.1-201ENST00000449607 712 ntBASIC3.78□□□□□ -1.8
SATB2Q9UPW6 Z99714.1-201ENST00000450463 807 ntBASIC3.78□□□□□ -1.8
SATB2Q9UPW6 MTCO3P20-201ENST00000454926 688 ntBASIC3.78□□□□□ -1.8
SATB2Q9UPW6 AC004801.2-202ENST00000463559 283 ntBASIC3.78□□□□□ -1.8
SATB2Q9UPW6 AC010307.1-201ENST00000467206 836 ntBASIC3.78□□□□□ -1.8
SATB2Q9UPW6 RPL23AP44-201ENST00000482216 473 ntBASIC3.78□□□□□ -1.8
SATB2Q9UPW6 DYNLL1P6-201ENST00000503440 264 ntBASIC3.78□□□□□ -1.8
SATB2Q9UPW6 SNORA70.24-201ENST00000517233 118 ntBASIC3.78□□□□□ -1.8
SATB2Q9UPW6 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.78□□□□□ -1.8
SATB2Q9UPW6 MTND2P26-201ENST00000528255 1029 ntBASIC3.78□□□□□ -1.8
SATB2Q9UPW6 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.78□□□□□ -1.8
SATB2Q9UPW6 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SATB2Q9UPW6 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.78□□□□□ -1.8
SATB2Q9UPW6 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.78□□□□□ -1.8
SATB2Q9UPW6 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.78□□□□□ -1.8
SATB2Q9UPW6 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SATB2Q9UPW6 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SATB2Q9UPW6 AC008121.2-201ENST00000614647 523 ntBASIC3.78□□□□□ -1.8
SATB2Q9UPW6 AC015967.1-201ENST00000619893 476 ntBASIC3.78□□□□□ -1.8
SATB2Q9UPW6 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.78□□□□□ -1.8
SATB2Q9UPW6 AL157770.1-201ENST00000623049 439 ntBASIC3.78□□□□□ -1.8
SATB2Q9UPW6 OR1S1-201ENST00000624470 978 ntBASIC3.78□□□□□ -1.8
SATB2Q9UPW6 AL773545.4-201ENST00000637262 310 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms