Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SCN11AQ9UI33 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SCN11AQ9UI33 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SCN11AQ9UI33 MTCO3P31-201ENST00000405526 789 ntBASIC3.37□□□□□ -1.87
SCN11AQ9UI33 AL355379.1-201ENST00000405542 640 ntBASIC3.37□□□□□ -1.87
SCN11AQ9UI33 AC234781.4-201ENST00000419384 244 ntBASIC3.37□□□□□ -1.87
SCN11AQ9UI33 BX276092.3-201ENST00000424182 230 ntBASIC3.37□□□□□ -1.87
SCN11AQ9UI33 MTCO1P39-201ENST00000426148 480 ntBASIC3.37□□□□□ -1.87
SCN11AQ9UI33 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.37□□□□□ -1.87
SCN11AQ9UI33 WASF1P1-201ENST00000447560 1131 ntBASIC3.37□□□□□ -1.87
SCN11AQ9UI33 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.37□□□□□ -1.87
SCN11AQ9UI33 AC016687.1-201ENST00000482574 353 ntBASIC3.37□□□□□ -1.87
SCN11AQ9UI33 RNA5SP380-201ENST00000517190 98 ntBASIC3.37□□□□□ -1.87
SCN11AQ9UI33 VTA1P2-201ENST00000520205 911 ntBASIC3.37□□□□□ -1.87
SCN11AQ9UI33 AP000873.5-201ENST00000533906 236 ntBASIC3.37□□□□□ -1.87
SCN11AQ9UI33 MIR3605-201ENST00000583214 100 ntBASIC3.37□□□□□ -1.87
SCN11AQ9UI33 VN1R79P-201ENST00000593540 513 ntBASIC3.37□□□□□ -1.87
SCN11AQ9UI33 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.37□□□□□ -1.87
SCN11AQ9UI33 AC007621.1-201ENST00000604544 437 ntBASIC3.37□□□□□ -1.87
SCN11AQ9UI33 FRG1DP-201ENST00000635586 771 ntBASIC3.37□□□□□ -1.87
SCN11AQ9UI33 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SCN11AQ9UI33 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SCN11AQ9UI33 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.37□□□□□ -1.87
SCN11AQ9UI33 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
SCN11AQ9UI33 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.37□□□□□ -1.87
SCN11AQ9UI33 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SCN11AQ9UI33 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SCN11AQ9UI33 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SCN11AQ9UI33 BTG3P1-201ENST00000435859 716 ntBASIC3.36□□□□□ -1.87
SCN11AQ9UI33 AL162388.1-201ENST00000450912 352 ntBASIC3.36□□□□□ -1.87
SCN11AQ9UI33 RPL23AP14-201ENST00000468281 468 ntBASIC3.36□□□□□ -1.87
SCN11AQ9UI33 IGKV3-31-201ENST00000523109 329 ntBASIC3.36□□□□□ -1.87
SCN11AQ9UI33 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.36□□□□□ -1.87
SCN11AQ9UI33 AP002967.1-201ENST00000624203 539 ntBASIC3.36□□□□□ -1.87
SCN11AQ9UI33 AC063923.1-201ENST00000478982 1619 ntBASIC3.36□□□□□ -1.87
SCN11AQ9UI33 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SCN11AQ9UI33 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SCN11AQ9UI33 AP000526.1-201ENST00000603308 1388 ntBASIC3.36□□□□□ -1.87
SCN11AQ9UI33 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.36□□□□□ -1.87
SCN11AQ9UI33 MIR181B1-201ENST00000385240 110 ntBASIC3.35□□□□□ -1.87
SCN11AQ9UI33 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SCN11AQ9UI33 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.35□□□□□ -1.87
SCN11AQ9UI33 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.35□□□□□ -1.87
SCN11AQ9UI33 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SCN11AQ9UI33 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.35□□□□□ -1.87
SCN11AQ9UI33 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.35□□□□□ -1.87
SCN11AQ9UI33 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SCN11AQ9UI33 snoU13.23-201ENST00000458863 104 ntBASIC3.35□□□□□ -1.87
SCN11AQ9UI33 AC092045.1-201ENST00000495716 1231 ntBASIC3.35□□□□□ -1.87
SCN11AQ9UI33 AC068305.1-201ENST00000497406 726 ntBASIC3.35□□□□□ -1.87
SCN11AQ9UI33 KLHL2P1-201ENST00000508691 521 ntBASIC3.35□□□□□ -1.87
SCN11AQ9UI33 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.35□□□□□ -1.87
SCN11AQ9UI33 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.35□□□□□ -1.87
SCN11AQ9UI33 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.35□□□□□ -1.87
SCN11AQ9UI33 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SCN11AQ9UI33 AC008277.2-201ENST00000605196 797 ntBASIC3.35□□□□□ -1.87
SCN11AQ9UI33 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.35□□□□□ -1.87
SCN11AQ9UI33 AC008725.1-201ENST00000605123 2263 ntBASIC3.35□□□□□ -1.87
SCN11AQ9UI33 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.35□□□□□ -1.87
SCN11AQ9UI33 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC3.35□□□□□ -1.87
SCN11AQ9UI33 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.35□□□□□ -1.87
SCN11AQ9UI33 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SCN11AQ9UI33 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SCN11AQ9UI33 AL356806.1-201ENST00000422524 916 ntBASIC3.35□□□□□ -1.87
SCN11AQ9UI33 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.35□□□□□ -1.87
SCN11AQ9UI33 RPL7P12-201ENST00000446719 750 ntBASIC3.35□□□□□ -1.87
SCN11AQ9UI33 OR8L1P-201ENST00000534005 955 ntBASIC3.35□□□□□ -1.87
SCN11AQ9UI33 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SCN11AQ9UI33 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.35□□□□□ -1.87
SCN11AQ9UI33 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.35□□□□□ -1.87
SCN11AQ9UI33 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.35□□□□□ -1.87
SCN11AQ9UI33 AC138915.3-201ENST00000562908 1389 ntBASIC3.34□□□□□ -1.87
SCN11AQ9UI33 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
SCN11AQ9UI33 BTF3P7-201ENST00000407097 488 ntBASIC3.34□□□□□ -1.87
SCN11AQ9UI33 RN7SKP192-201ENST00000411291 327 ntBASIC3.34□□□□□ -1.87
SCN11AQ9UI33 RN7SKP283-201ENST00000517197 270 ntBASIC3.34□□□□□ -1.87
SCN11AQ9UI33 CBX3P5-201ENST00000552017 521 ntBASIC3.34□□□□□ -1.87
SCN11AQ9UI33 AL442163.2-201ENST00000553912 710 ntBASIC3.34□□□□□ -1.87
SCN11AQ9UI33 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.34□□□□□ -1.87
SCN11AQ9UI33 AC079228.1-201ENST00000624774 1049 ntBASIC3.34□□□□□ -1.87
SCN11AQ9UI33 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
SCN11AQ9UI33 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SCN11AQ9UI33 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SCN11AQ9UI33 ZNF542P-204ENST00000482727 1305 ntBASIC3.34□□□□□ -1.87
SCN11AQ9UI33 AL512633.1-201ENST00000399931 655 ntBASIC3.33□□□□□ -1.88
SCN11AQ9UI33 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.33□□□□□ -1.88
SCN11AQ9UI33 KCTD9P5-201ENST00000504141 1170 ntBASIC3.33□□□□□ -1.88
SCN11AQ9UI33 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.33□□□□□ -1.88
SCN11AQ9UI33 USP9YP5-201ENST00000511770 630 ntBASIC3.33□□□□□ -1.88
SCN11AQ9UI33 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.33□□□□□ -1.88
SCN11AQ9UI33 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.33□□□□□ -1.88
SCN11AQ9UI33 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.33□□□□□ -1.88
SCN11AQ9UI33 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.33□□□□□ -1.88
SCN11AQ9UI33 SNORD53-201ENST00000579969 78 ntBASIC3.33□□□□□ -1.88
SCN11AQ9UI33 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.33□□□□□ -1.88
SCN11AQ9UI33 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.33□□□□□ -1.88
SCN11AQ9UI33 AC103810.6-201ENST00000606708 136 ntBASIC3.33□□□□□ -1.88
SCN11AQ9UI33 MIR7111-201ENST00000619751 72 ntBASIC3.33□□□□□ -1.88
SCN11AQ9UI33 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.33□□□□□ -1.88
SCN11AQ9UI33 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms