Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS11Q9H270 GPM6BP2-201ENST00000432046 144 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 TAAR7P-201ENST00000436141 242 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS11Q9H270 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS11Q9H270 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS11Q9H270 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS11Q9H270 CEACAMP9-201ENST00000442990 513 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 GPM6BP1-201ENST00000446387 144 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 PDSS1P2-201ENST00000449397 678 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 RAD23BP3-201ENST00000454157 1152 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 MTCO3P11-201ENST00000455103 774 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 SETP20-201ENST00000457046 852 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 AC011225.1-201ENST00000457751 369 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
VPS11Q9H270 AC105914.1-201ENST00000511798 226 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 MTCO2P4-201ENST00000517968 247 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS11Q9H270 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS11Q9H270 OR5M7P-201ENST00000526140 972 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS11Q9H270 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS11Q9H270 LSM6P2-201ENST00000552208 177 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 AC087477.6-201ENST00000559595 843 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 SNORD95-201ENST00000579879 68 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 AC020914.6-201ENST00000594327 272 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS11Q9H270 AC107214.2-201ENST00000608204 634 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 MLECP1-201ENST00000615893 709 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS11Q9H270 AC090527.3-201ENST00000619041 548 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS11Q9H270 AP000843.1-201ENST00000624880 701 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 AL355480.1-201ENST00000629041 99 ntBASIC4.97□□□□□ -1.61
VPS11Q9H270 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
VPS11Q9H270 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
VPS11Q9H270 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS11Q9H270 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS11Q9H270 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS11Q9H270 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
VPS11Q9H270 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
VPS11Q9H270 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
VPS11Q9H270 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
VPS11Q9H270 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS11Q9H270 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS11Q9H270 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
VPS11Q9H270 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS11Q9H270 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VPS11Q9H270 RNA5SP435-201ENST00000364044 108 ntBASIC4.96□□□□□ -1.62
VPS11Q9H270 SNORA63C-201ENST00000364578 129 ntBASIC4.96□□□□□ -1.62
VPS11Q9H270 Y_RNA.296-201ENST00000364930 108 ntBASIC4.96□□□□□ -1.62
VPS11Q9H270 RNU1-43P-201ENST00000365052 165 ntBASIC4.96□□□□□ -1.62
VPS11Q9H270 RN7SKP269-201ENST00000365545 319 ntBASIC4.96□□□□□ -1.62
VPS11Q9H270 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
VPS11Q9H270 SNORA66-201ENST00000384792 133 ntBASIC4.96□□□□□ -1.62
VPS11Q9H270 Z97832.1-201ENST00000402490 328 ntBASIC4.96□□□□□ -1.62
VPS11Q9H270 BTBD10P2-201ENST00000404779 676 ntBASIC4.96□□□□□ -1.62
VPS11Q9H270 AMD1P2-201ENST00000412936 992 ntBASIC4.96□□□□□ -1.62
VPS11Q9H270 USP9YP27-201ENST00000418455 438 ntBASIC4.96□□□□□ -1.62
VPS11Q9H270 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS11Q9H270 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VPS11Q9H270 COX6CP15-201ENST00000426313 211 ntBASIC4.96□□□□□ -1.62
VPS11Q9H270 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS11Q9H270 SDCBPP1-201ENST00000440192 890 ntBASIC4.96□□□□□ -1.62
VPS11Q9H270 RPS29P9-201ENST00000440360 171 ntBASIC4.96□□□□□ -1.62
VPS11Q9H270 RPL23AP16-201ENST00000441715 421 ntBASIC4.96□□□□□ -1.62
VPS11Q9H270 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS11Q9H270 AC108463.1-201ENST00000450258 347 ntBASIC4.96□□□□□ -1.62
VPS11Q9H270 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS11Q9H270 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.96□□□□□ -1.62
VPS11Q9H270 AC087312.1-201ENST00000471411 480 ntBASIC4.96□□□□□ -1.62
VPS11Q9H270 RN7SL717P-201ENST00000478343 297 ntBASIC4.96□□□□□ -1.62
VPS11Q9H270 AC090013.1-201ENST00000485147 480 ntBASIC4.96□□□□□ -1.62
VPS11Q9H270 RPL39P36-201ENST00000490784 156 ntBASIC4.96□□□□□ -1.62
VPS11Q9H270 SETP14-201ENST00000497538 873 ntBASIC4.96□□□□□ -1.62
VPS11Q9H270 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VPS11Q9H270 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS11Q9H270 PAICSP4-201ENST00000517543 1253 ntBASIC4.96□□□□□ -1.62
VPS11Q9H270 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VPS11Q9H270 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS11Q9H270 AC104687.2-201ENST00000604442 342 ntBASIC4.96□□□□□ -1.62
VPS11Q9H270 AC027807.2-201ENST00000616099 408 ntBASIC4.96□□□□□ -1.62
VPS11Q9H270 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.96□□□□□ -1.62
VPS11Q9H270 MIR1321-201ENST00000637766 79 ntBASIC4.96□□□□□ -1.62
VPS11Q9H270 LINC01355-201ENST00000566551 5444 ntBASIC4.96□□□□□ -1.62
VPS11Q9H270 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
VPS11Q9H270 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS11Q9H270 MTCO1P9-201ENST00000505577 1534 ntBASIC4.96□□□□□ -1.62
VPS11Q9H270 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS11Q9H270 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS11Q9H270 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS11Q9H270 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS11Q9H270 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS11Q9H270 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS11Q9H270 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS11Q9H270 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.95□□□□□ -1.62
VPS11Q9H270 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VPS11Q9H270 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VPS11Q9H270 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms