Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SNORA7.4-201ENST00000384249 137 ntBASIC3.65□□□□□ -1.83
UPF3BQ9BZI7 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.65□□□□□ -1.83
UPF3BQ9BZI7 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.65□□□□□ -1.83
UPF3BQ9BZI7 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.65□□□□□ -1.83
UPF3BQ9BZI7 AC016696.1-201ENST00000446949 318 ntBASIC3.65□□□□□ -1.83
UPF3BQ9BZI7 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.65□□□□□ -1.83
UPF3BQ9BZI7 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.65□□□□□ -1.83
UPF3BQ9BZI7 AC146507.1-201ENST00000468335 354 ntBASIC3.65□□□□□ -1.83
UPF3BQ9BZI7 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.65□□□□□ -1.83
UPF3BQ9BZI7 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
UPF3BQ9BZI7 AC022080.3-201ENST00000544433 482 ntBASIC3.65□□□□□ -1.83
UPF3BQ9BZI7 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.65□□□□□ -1.83
UPF3BQ9BZI7 OR4T1P-201ENST00000554933 911 ntBASIC3.65□□□□□ -1.83
UPF3BQ9BZI7 MIR3945-201ENST00000581853 98 ntBASIC3.65□□□□□ -1.83
UPF3BQ9BZI7 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.65□□□□□ -1.83
UPF3BQ9BZI7 AC093732.2-201ENST00000607950 274 ntBASIC3.65□□□□□ -1.83
UPF3BQ9BZI7 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.65□□□□□ -1.83
UPF3BQ9BZI7 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.65□□□□□ -1.83
UPF3BQ9BZI7 AC138932.5-201ENST00000617759 563 ntBASIC3.65□□□□□ -1.83
UPF3BQ9BZI7 AC022079.2-201ENST00000619739 566 ntBASIC3.65□□□□□ -1.83
UPF3BQ9BZI7 AC018692.3-201ENST00000623929 123 ntBASIC3.65□□□□□ -1.83
UPF3BQ9BZI7 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.65□□□□□ -1.83
UPF3BQ9BZI7 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
UPF3BQ9BZI7 ZNF90P1-201ENST00000480493 1951 ntBASIC3.65□□□□□ -1.83
UPF3BQ9BZI7 MTND5P27-201ENST00000428871 1720 ntBASIC3.64□□□□□ -1.83
UPF3BQ9BZI7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
UPF3BQ9BZI7 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.64□□□□□ -1.83
UPF3BQ9BZI7 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.64□□□□□ -1.83
UPF3BQ9BZI7 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.64□□□□□ -1.83
UPF3BQ9BZI7 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.64□□□□□ -1.83
UPF3BQ9BZI7 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.64□□□□□ -1.83
UPF3BQ9BZI7 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
UPF3BQ9BZI7 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.64□□□□□ -1.83
UPF3BQ9BZI7 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.64□□□□□ -1.83
UPF3BQ9BZI7 AL031663.1-201ENST00000437445 219 ntBASIC3.64□□□□□ -1.83
UPF3BQ9BZI7 AC140076.1-201ENST00000449897 361 ntBASIC3.64□□□□□ -1.83
UPF3BQ9BZI7 MTND2P8-201ENST00000450555 1025 ntBASIC3.64□□□□□ -1.83
UPF3BQ9BZI7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.64□□□□□ -1.83
UPF3BQ9BZI7 AC109925.1-201ENST00000478069 331 ntBASIC3.64□□□□□ -1.83
UPF3BQ9BZI7 AC087276.1-201ENST00000529659 480 ntBASIC3.64□□□□□ -1.83
UPF3BQ9BZI7 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.64□□□□□ -1.83
UPF3BQ9BZI7 AP004242.1-201ENST00000533701 349 ntBASIC3.64□□□□□ -1.83
UPF3BQ9BZI7 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC3.64□□□□□ -1.83
UPF3BQ9BZI7 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.64□□□□□ -1.83
UPF3BQ9BZI7 MIR4672-201ENST00000583126 81 ntBASIC3.64□□□□□ -1.83
UPF3BQ9BZI7 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.64□□□□□ -1.83
UPF3BQ9BZI7 AC055764.2-201ENST00000610089 670 ntBASIC3.64□□□□□ -1.83
UPF3BQ9BZI7 AC007318.2-201ENST00000620999 243 ntBASIC3.64□□□□□ -1.83
UPF3BQ9BZI7 AC026422.1-201ENST00000623961 452 ntBASIC3.64□□□□□ -1.83
UPF3BQ9BZI7 AC019080.5-201ENST00000624891 757 ntBASIC3.64□□□□□ -1.83
UPF3BQ9BZI7 MIR4278-201ENST00000636094 69 ntBASIC3.64□□□□□ -1.83
UPF3BQ9BZI7 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.64□□□□□ -1.83
UPF3BQ9BZI7 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 SNORA31-201ENST00000362607 130 ntBASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 GSTA8P-201ENST00000404253 637 ntBASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 AC023347.2-201ENST00000433994 462 ntBASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 AC104629.2-201ENST00000468627 598 ntBASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 AC004924.1-201ENST00000480160 781 ntBASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 AC005921.1-201ENST00000510589 286 ntBASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 RNU6-1004P-201ENST00000516584 111 ntBASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 OR4H12P-201ENST00000556269 907 ntBASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 IGHV3-29-201ENST00000604817 344 ntBASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 AC099506.2-201ENST00000623074 221 ntBASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
UPF3BQ9BZI7 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.62□□□□□ -1.83
UPF3BQ9BZI7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
UPF3BQ9BZI7 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
UPF3BQ9BZI7 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.62□□□□□ -1.83
UPF3BQ9BZI7 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.62□□□□□ -1.83
UPF3BQ9BZI7 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
UPF3BQ9BZI7 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.62□□□□□ -1.83
UPF3BQ9BZI7 RNU6-317P-201ENST00000384031 107 ntBASIC3.62□□□□□ -1.83
UPF3BQ9BZI7 SNORD15B-201ENST00000384714 146 ntBASIC3.62□□□□□ -1.83
UPF3BQ9BZI7 SNORA48.8-201ENST00000391324 134 ntBASIC3.62□□□□□ -1.83
UPF3BQ9BZI7 AL353692.2-201ENST00000407054 335 ntBASIC3.62□□□□□ -1.83
UPF3BQ9BZI7 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
UPF3BQ9BZI7 AL139413.1-201ENST00000421309 217 ntBASIC3.62□□□□□ -1.83
UPF3BQ9BZI7 AC025750.2-201ENST00000442609 450 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms