Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AC010153.1-201ENST00000432862 727 ntBASIC5.02□□□□□ -1.61
NUP88Q99567 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.02□□□□□ -1.61
NUP88Q99567 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.02□□□□□ -1.61
NUP88Q99567 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5.02□□□□□ -1.61
NUP88Q99567 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.02□□□□□ -1.61
NUP88Q99567 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.02□□□□□ -1.61
NUP88Q99567 RPS7P7-201ENST00000463499 571 ntBASIC5.02□□□□□ -1.61
NUP88Q99567 AC022795.1-201ENST00000473808 480 ntBASIC5.02□□□□□ -1.61
NUP88Q99567 AC109486.1-201ENST00000486833 374 ntBASIC5.02□□□□□ -1.61
NUP88Q99567 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.02□□□□□ -1.61
NUP88Q99567 AC090453.1-201ENST00000495560 436 ntBASIC5.02□□□□□ -1.61
NUP88Q99567 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.02□□□□□ -1.61
NUP88Q99567 AC005798.1-201ENST00000513715 387 ntBASIC5.02□□□□□ -1.61
NUP88Q99567 RN7SKP234-201ENST00000517173 224 ntBASIC5.02□□□□□ -1.61
NUP88Q99567 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.02□□□□□ -1.61
NUP88Q99567 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.02□□□□□ -1.61
NUP88Q99567 AC136618.2-201ENST00000575091 400 ntBASIC5.02□□□□□ -1.61
NUP88Q99567 VN1R85P-201ENST00000601587 426 ntBASIC5.02□□□□□ -1.61
NUP88Q99567 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NUP88Q99567 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.02□□□□□ -1.61
NUP88Q99567 AC007546.2-201ENST00000623996 360 ntBASIC5.02□□□□□ -1.61
NUP88Q99567 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUP88Q99567 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.02□□□□□ -1.61
NUP88Q99567 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUP88Q99567 AC017104.4-201ENST00000636283 1592 ntBASIC5.02□□□□□ -1.61
NUP88Q99567 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
NUP88Q99567 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.02□□□□□ -1.61
NUP88Q99567 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUP88Q99567 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
NUP88Q99567 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUP88Q99567 RNU1-14P-201ENST00000362759 152 ntBASIC5.01□□□□□ -1.61
NUP88Q99567 U3.4-201ENST00000363352 213 ntBASIC5.01□□□□□ -1.61
NUP88Q99567 SNORA57.1-201ENST00000391227 145 ntBASIC5.01□□□□□ -1.61
NUP88Q99567 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.01□□□□□ -1.61
NUP88Q99567 AC109780.2-201ENST00000413467 845 ntBASIC5.01□□□□□ -1.61
NUP88Q99567 GLRXP1-201ENST00000423261 334 ntBASIC5.01□□□□□ -1.61
NUP88Q99567 RPL23AP25-201ENST00000430973 463 ntBASIC5.01□□□□□ -1.61
NUP88Q99567 AL512286.1-201ENST00000439244 400 ntBASIC5.01□□□□□ -1.61
NUP88Q99567 AL357520.1-201ENST00000441557 453 ntBASIC5.01□□□□□ -1.61
NUP88Q99567 HSPE1P28-201ENST00000443139 211 ntBASIC5.01□□□□□ -1.61
NUP88Q99567 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.01□□□□□ -1.61
NUP88Q99567 RPL7P31-201ENST00000450192 724 ntBASIC5.01□□□□□ -1.61
NUP88Q99567 AC005297.2-201ENST00000450430 606 ntBASIC5.01□□□□□ -1.61
NUP88Q99567 VN1R32P-201ENST00000452234 905 ntBASIC5.01□□□□□ -1.61
NUP88Q99567 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.01□□□□□ -1.61
NUP88Q99567 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.01□□□□□ -1.61
NUP88Q99567 RN7SL812P-201ENST00000493791 279 ntBASIC5.01□□□□□ -1.61
NUP88Q99567 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.01□□□□□ -1.61
NUP88Q99567 MTND4P2-201ENST00000507767 1203 ntBASIC5.01□□□□□ -1.61
NUP88Q99567 AC109458.1-201ENST00000508858 316 ntBASIC5.01□□□□□ -1.61
NUP88Q99567 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.01□□□□□ -1.61
NUP88Q99567 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.01□□□□□ -1.61
NUP88Q99567 AL139174.1-201ENST00000531489 886 ntBASIC5.01□□□□□ -1.61
NUP88Q99567 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.01□□□□□ -1.61
NUP88Q99567 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NUP88Q99567 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.01□□□□□ -1.61
NUP88Q99567 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.01□□□□□ -1.61
NUP88Q99567 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.01□□□□□ -1.61
NUP88Q99567 AC008507.1-201ENST00000587506 734 ntBASIC5.01□□□□□ -1.61
NUP88Q99567 AC128687.1-201ENST00000605304 619 ntBASIC5.01□□□□□ -1.61
NUP88Q99567 AL008729.2-201ENST00000606393 473 ntBASIC5.01□□□□□ -1.61
NUP88Q99567 AC090116.1-201ENST00000615679 446 ntBASIC5.01□□□□□ -1.61
NUP88Q99567 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.01□□□□□ -1.61
NUP88Q99567 MIR8059-201ENST00000620427 81 ntBASIC5.01□□□□□ -1.61
NUP88Q99567 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NUP88Q99567 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.01□□□□□ -1.61
NUP88Q99567 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUP88Q99567 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUP88Q99567 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5□□□□□ -1.61
NUP88Q99567 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5□□□□□ -1.61
NUP88Q99567 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5□□□□□ -1.61
NUP88Q99567 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUP88Q99567 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5□□□□□ -1.61
NUP88Q99567 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUP88Q99567 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
NUP88Q99567 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUP88Q99567 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUP88Q99567 SPRR2C-201ENST00000290702 219 ntBASIC5□□□□□ -1.61
NUP88Q99567 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
NUP88Q99567 RPL31P1-201ENST00000398116 372 ntBASIC5□□□□□ -1.61
NUP88Q99567 RN7SKP142-201ENST00000411236 328 ntBASIC5□□□□□ -1.61
NUP88Q99567 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5□□□□□ -1.61
NUP88Q99567 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC5□□□□□ -1.61
NUP88Q99567 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5□□□□□ -1.61
NUP88Q99567 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5□□□□□ -1.61
NUP88Q99567 COX6B1P7-201ENST00000430845 235 ntBASIC5□□□□□ -1.61
NUP88Q99567 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5□□□□□ -1.61
NUP88Q99567 BTF3P10-201ENST00000433415 495 ntBASIC5□□□□□ -1.61
NUP88Q99567 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5□□□□□ -1.61
NUP88Q99567 LARP1BP3-201ENST00000437229 869 ntBASIC5□□□□□ -1.61
NUP88Q99567 COX6CP2-201ENST00000444980 225 ntBASIC5□□□□□ -1.61
NUP88Q99567 BX322784.1-201ENST00000455793 1077 ntBASIC5□□□□□ -1.61
NUP88Q99567 SNRPGP9-201ENST00000456025 225 ntBASIC5□□□□□ -1.61
NUP88Q99567 PABPC1P3-201ENST00000469174 459 ntBASIC5□□□□□ -1.61
NUP88Q99567 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5□□□□□ -1.61
NUP88Q99567 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5□□□□□ -1.61
NUP88Q99567 AC010424.1-201ENST00000506336 297 ntBASIC5□□□□□ -1.61
NUP88Q99567 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5□□□□□ -1.61
NUP88Q99567 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5□□□□□ -1.61
NUP88Q99567 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms