Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC3.33□□□□□ -1.88
C9orf72Q96LT7 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.33□□□□□ -1.88
C9orf72Q96LT7 AC090312.2-201ENST00000582687 378 ntBASIC3.33□□□□□ -1.88
C9orf72Q96LT7 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.33□□□□□ -1.88
C9orf72Q96LT7 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.33□□□□□ -1.88
C9orf72Q96LT7 AL162233.1-201ENST00000620014 944 ntBASIC3.33□□□□□ -1.88
C9orf72Q96LT7 PLCE1P1-201ENST00000622094 305 ntBASIC3.33□□□□□ -1.88
C9orf72Q96LT7 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.33□□□□□ -1.88
C9orf72Q96LT7 AC104446.1-201ENST00000613728 1321 ntBASIC3.33□□□□□ -1.88
C9orf72Q96LT7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
C9orf72Q96LT7 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
C9orf72Q96LT7 AL356274.2-201ENST00000624379 3752 ntBASIC3.33□□□□□ -1.88
C9orf72Q96LT7 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.33□□□□□ -1.88
C9orf72Q96LT7 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
C9orf72Q96LT7 MTND5P24-201ENST00000438892 1767 ntBASIC3.33□□□□□ -1.88
C9orf72Q96LT7 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.33□□□□□ -1.88
C9orf72Q96LT7 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.32□□□□□ -1.88
C9orf72Q96LT7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.32□□□□□ -1.88
C9orf72Q96LT7 AL583834.1-201ENST00000406943 343 ntBASIC3.32□□□□□ -1.88
C9orf72Q96LT7 RNA5SP229-201ENST00000410809 99 ntBASIC3.32□□□□□ -1.88
C9orf72Q96LT7 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.32□□□□□ -1.88
C9orf72Q96LT7 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.32□□□□□ -1.88
C9orf72Q96LT7 RPL32P35-201ENST00000415214 394 ntBASIC3.32□□□□□ -1.88
C9orf72Q96LT7 RPF2P1-201ENST00000424137 906 ntBASIC3.32□□□□□ -1.88
C9orf72Q96LT7 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.32□□□□□ -1.88
C9orf72Q96LT7 RPL21P112-201ENST00000434403 463 ntBASIC3.32□□□□□ -1.88
C9orf72Q96LT7 AL662791.1-201ENST00000441992 928 ntBASIC3.32□□□□□ -1.88
C9orf72Q96LT7 AC068135.1-201ENST00000446164 246 ntBASIC3.32□□□□□ -1.88
C9orf72Q96LT7 RN7SL807P-201ENST00000470923 297 ntBASIC3.32□□□□□ -1.88
C9orf72Q96LT7 RPS4XP13-201ENST00000483219 789 ntBASIC3.32□□□□□ -1.88
C9orf72Q96LT7 AC093663.2-201ENST00000484625 313 ntBASIC3.32□□□□□ -1.88
C9orf72Q96LT7 HMGB3P15-201ENST00000507326 574 ntBASIC3.32□□□□□ -1.88
C9orf72Q96LT7 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.32□□□□□ -1.88
C9orf72Q96LT7 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.32□□□□□ -1.88
C9orf72Q96LT7 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.32□□□□□ -1.88
C9orf72Q96LT7 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.32□□□□□ -1.88
C9orf72Q96LT7 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.32□□□□□ -1.88
C9orf72Q96LT7 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.32□□□□□ -1.88
C9orf72Q96LT7 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.32□□□□□ -1.88
C9orf72Q96LT7 AC010735.1-201ENST00000567305 1026 ntBASIC3.32□□□□□ -1.88
C9orf72Q96LT7 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.32□□□□□ -1.88
C9orf72Q96LT7 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.32□□□□□ -1.88
C9orf72Q96LT7 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.32□□□□□ -1.88
C9orf72Q96LT7 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
C9orf72Q96LT7 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.32□□□□□ -1.88
C9orf72Q96LT7 AC091953.5-201ENST00000622919 233 ntBASIC3.32□□□□□ -1.88
C9orf72Q96LT7 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.32□□□□□ -1.88
C9orf72Q96LT7 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.32□□□□□ -1.88
C9orf72Q96LT7 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.32□□□□□ -1.88
C9orf72Q96LT7 AL353746.1-201ENST00000566293 6881 ntBASIC3.32□□□□□ -1.88
C9orf72Q96LT7 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
C9orf72Q96LT7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
C9orf72Q96LT7 AF117829.1-206ENST00000621883 3802 ntBASIC3.31□□□□□ -1.88
C9orf72Q96LT7 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.31□□□□□ -1.88
C9orf72Q96LT7 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
C9orf72Q96LT7 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
C9orf72Q96LT7 MTND4P8-201ENST00000514997 1362 ntBASIC3.31□□□□□ -1.88
C9orf72Q96LT7 SNORD51.1-201ENST00000365405 77 ntBASIC3.31□□□□□ -1.88
C9orf72Q96LT7 AL353692.2-201ENST00000407054 335 ntBASIC3.31□□□□□ -1.88
C9orf72Q96LT7 BX323014.1-201ENST00000412876 237 ntBASIC3.31□□□□□ -1.88
C9orf72Q96LT7 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.31□□□□□ -1.88
C9orf72Q96LT7 EI24P1-201ENST00000416584 867 ntBASIC3.31□□□□□ -1.88
C9orf72Q96LT7 AC005517.2-201ENST00000424673 553 ntBASIC3.31□□□□□ -1.88
C9orf72Q96LT7 AC005300.1-201ENST00000428401 373 ntBASIC3.31□□□□□ -1.88
C9orf72Q96LT7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
C9orf72Q96LT7 YWHAZP8-201ENST00000436935 731 ntBASIC3.31□□□□□ -1.88
C9orf72Q96LT7 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.31□□□□□ -1.88
C9orf72Q96LT7 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.31□□□□□ -1.88
C9orf72Q96LT7 ATP5C1P1-201ENST00000441945 895 ntBASIC3.31□□□□□ -1.88
C9orf72Q96LT7 AC004865.1-201ENST00000442276 1003 ntBASIC3.31□□□□□ -1.88
C9orf72Q96LT7 AL591503.2-201ENST00000442314 1005 ntBASIC3.31□□□□□ -1.88
C9orf72Q96LT7 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.31□□□□□ -1.88
C9orf72Q96LT7 AL513343.1-201ENST00000451818 792 ntBASIC3.31□□□□□ -1.88
C9orf72Q96LT7 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.31□□□□□ -1.88
C9orf72Q96LT7 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.31□□□□□ -1.88
C9orf72Q96LT7 AC092754.2-201ENST00000463506 460 ntBASIC3.31□□□□□ -1.88
C9orf72Q96LT7 AC093278.1-201ENST00000494700 600 ntBASIC3.31□□□□□ -1.88
C9orf72Q96LT7 APOOP4-201ENST00000513530 597 ntBASIC3.31□□□□□ -1.88
C9orf72Q96LT7 SNORA74D-201ENST00000516404 141 ntBASIC3.31□□□□□ -1.88
C9orf72Q96LT7 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
C9orf72Q96LT7 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.31□□□□□ -1.88
C9orf72Q96LT7 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.31□□□□□ -1.88
C9orf72Q96LT7 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.31□□□□□ -1.88
C9orf72Q96LT7 MIR3200-201ENST00000580767 85 ntBASIC3.31□□□□□ -1.88
C9orf72Q96LT7 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.31□□□□□ -1.88
C9orf72Q96LT7 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.31□□□□□ -1.88
C9orf72Q96LT7 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.31□□□□□ -1.88
C9orf72Q96LT7 AC092184.1-201ENST00000625042 715 ntBASIC3.31□□□□□ -1.88
C9orf72Q96LT7 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.31□□□□□ -1.88
C9orf72Q96LT7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
C9orf72Q96LT7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
C9orf72Q96LT7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
C9orf72Q96LT7 AL672296.1-201ENST00000427780 2158 ntBASIC3.3□□□□□ -1.88
C9orf72Q96LT7 AL512646.1-201ENST00000269395 1077 ntBASIC3.3□□□□□ -1.88
C9orf72Q96LT7 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.3□□□□□ -1.88
C9orf72Q96LT7 RNU6-600P-201ENST00000362524 99 ntBASIC3.3□□□□□ -1.88
C9orf72Q96LT7 RNA5SP295-201ENST00000362655 121 ntBASIC3.3□□□□□ -1.88
C9orf72Q96LT7 U3.19-201ENST00000390893 196 ntBASIC3.3□□□□□ -1.88
C9orf72Q96LT7 SNORA48.8-201ENST00000391324 134 ntBASIC3.3□□□□□ -1.88
C9orf72Q96LT7 RPL21P3-201ENST00000395517 478 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms