Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AL445529.1-201ENST00000398713 389 ntBASIC3.98□□□□□ -1.77
USP47Q96K76 AC013404.1-201ENST00000413068 249 ntBASIC3.98□□□□□ -1.77
USP47Q96K76 NUP35P1-201ENST00000422734 947 ntBASIC3.98□□□□□ -1.77
USP47Q96K76 AL606490.7-201ENST00000433136 191 ntBASIC3.98□□□□□ -1.77
USP47Q96K76 RPS24P13-201ENST00000442520 397 ntBASIC3.98□□□□□ -1.77
USP47Q96K76 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.98□□□□□ -1.77
USP47Q96K76 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.98□□□□□ -1.77
USP47Q96K76 AC126121.1-201ENST00000482313 553 ntBASIC3.98□□□□□ -1.77
USP47Q96K76 PRELID3BP7-201ENST00000503606 469 ntBASIC3.98□□□□□ -1.77
USP47Q96K76 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.98□□□□□ -1.77
USP47Q96K76 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.98□□□□□ -1.77
USP47Q96K76 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.98□□□□□ -1.77
USP47Q96K76 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.98□□□□□ -1.77
USP47Q96K76 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.98□□□□□ -1.77
USP47Q96K76 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.98□□□□□ -1.77
USP47Q96K76 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.98□□□□□ -1.77
USP47Q96K76 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.98□□□□□ -1.77
USP47Q96K76 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.98□□□□□ -1.77
USP47Q96K76 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.98□□□□□ -1.77
USP47Q96K76 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.98□□□□□ -1.77
USP47Q96K76 NRBF2P5-201ENST00000603087 788 ntBASIC3.98□□□□□ -1.77
USP47Q96K76 RPL23AP92-201ENST00000603609 255 ntBASIC3.98□□□□□ -1.77
USP47Q96K76 AC136601.2-201ENST00000604356 474 ntBASIC3.98□□□□□ -1.77
USP47Q96K76 ATP1B3P1-201ENST00000605365 821 ntBASIC3.98□□□□□ -1.77
USP47Q96K76 AC135803.1-201ENST00000608748 565 ntBASIC3.98□□□□□ -1.77
USP47Q96K76 AC055764.2-201ENST00000610089 670 ntBASIC3.98□□□□□ -1.77
USP47Q96K76 AC010338.1-201ENST00000621823 717 ntBASIC3.98□□□□□ -1.77
USP47Q96K76 AC000123.2-201ENST00000623124 461 ntBASIC3.98□□□□□ -1.77
USP47Q96K76 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
USP47Q96K76 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
USP47Q96K76 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.97□□□□□ -1.77
USP47Q96K76 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
USP47Q96K76 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
USP47Q96K76 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
USP47Q96K76 MTND5P19-201ENST00000424872 1794 ntBASIC3.97□□□□□ -1.77
USP47Q96K76 RAD1P1-201ENST00000231383 813 ntBASIC3.97□□□□□ -1.77
USP47Q96K76 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
USP47Q96K76 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USP47Q96K76 MIR512-1-201ENST00000384913 84 ntBASIC3.97□□□□□ -1.77
USP47Q96K76 AC023512.1-201ENST00000444513 499 ntBASIC3.97□□□□□ -1.77
USP47Q96K76 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.97□□□□□ -1.77
USP47Q96K76 AP001025.2-201ENST00000490908 477 ntBASIC3.97□□□□□ -1.77
USP47Q96K76 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.97□□□□□ -1.77
USP47Q96K76 VTA1P2-201ENST00000520205 911 ntBASIC3.97□□□□□ -1.77
USP47Q96K76 COX6CP8-201ENST00000522620 226 ntBASIC3.97□□□□□ -1.77
USP47Q96K76 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.97□□□□□ -1.77
USP47Q96K76 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.97□□□□□ -1.77
USP47Q96K76 VN1R90P-201ENST00000595717 726 ntBASIC3.97□□□□□ -1.77
USP47Q96K76 AC090525.3-201ENST00000605601 189 ntBASIC3.97□□□□□ -1.77
USP47Q96K76 AP006248.2-201ENST00000623309 592 ntBASIC3.97□□□□□ -1.77
USP47Q96K76 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
USP47Q96K76 IGHVIII-44-202ENST00000636235 289 ntBASIC3.97□□□□□ -1.77
USP47Q96K76 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.97□□□□□ -1.77
USP47Q96K76 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.97□□□□□ -1.77
USP47Q96K76 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USP47Q96K76 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
USP47Q96K76 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
USP47Q96K76 RNU4-82P-201ENST00000362443 140 ntBASIC3.96□□□□□ -1.78
USP47Q96K76 MIR181A2-201ENST00000384863 110 ntBASIC3.96□□□□□ -1.78
USP47Q96K76 AL138785.1-201ENST00000425821 331 ntBASIC3.96□□□□□ -1.78
USP47Q96K76 RPL21P40-201ENST00000428586 483 ntBASIC3.96□□□□□ -1.78
USP47Q96K76 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.96□□□□□ -1.78
USP47Q96K76 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.96□□□□□ -1.78
USP47Q96K76 AC011037.1-201ENST00000483964 558 ntBASIC3.96□□□□□ -1.78
USP47Q96K76 AC018797.3-201ENST00000513388 1241 ntBASIC3.96□□□□□ -1.78
USP47Q96K76 AC090819.1-201ENST00000523800 1111 ntBASIC3.96□□□□□ -1.78
USP47Q96K76 FAM60DP-201ENST00000524174 632 ntBASIC3.96□□□□□ -1.78
USP47Q96K76 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
USP47Q96K76 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.96□□□□□ -1.78
USP47Q96K76 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC3.96□□□□□ -1.78
USP47Q96K76 AC083760.1-201ENST00000589621 670 ntBASIC3.96□□□□□ -1.78
USP47Q96K76 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
USP47Q96K76 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.96□□□□□ -1.78
USP47Q96K76 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.96□□□□□ -1.78
USP47Q96K76 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
USP47Q96K76 AL359693.1-201ENST00000614959 2407 ntBASIC3.96□□□□□ -1.78
USP47Q96K76 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USP47Q96K76 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USP47Q96K76 MIR3074-201ENST00000384885 81 ntBASIC3.95□□□□□ -1.78
USP47Q96K76 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
USP47Q96K76 MIR1183-201ENST00000408856 89 ntBASIC3.95□□□□□ -1.78
USP47Q96K76 MTCO1P57-201ENST00000432182 261 ntBASIC3.95□□□□□ -1.78
USP47Q96K76 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.95□□□□□ -1.78
USP47Q96K76 SLC31A1P1-201ENST00000451221 567 ntBASIC3.95□□□□□ -1.78
USP47Q96K76 HMGB1P3-201ENST00000502802 616 ntBASIC3.95□□□□□ -1.78
USP47Q96K76 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.95□□□□□ -1.78
USP47Q96K76 AC111000.2-201ENST00000507775 550 ntBASIC3.95□□□□□ -1.78
USP47Q96K76 AC117522.3-201ENST00000507974 584 ntBASIC3.95□□□□□ -1.78
USP47Q96K76 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.95□□□□□ -1.78
USP47Q96K76 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.95□□□□□ -1.78
USP47Q96K76 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.95□□□□□ -1.78
USP47Q96K76 AC023158.1-201ENST00000561632 1025 ntBASIC3.95□□□□□ -1.78
USP47Q96K76 HMGB1P6-201ENST00000569046 646 ntBASIC3.95□□□□□ -1.78
USP47Q96K76 MIR4716-201ENST00000579628 84 ntBASIC3.95□□□□□ -1.78
USP47Q96K76 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.95□□□□□ -1.78
USP47Q96K76 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.95□□□□□ -1.78
USP47Q96K76 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.95□□□□□ -1.78
USP47Q96K76 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
USP47Q96K76 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USP47Q96K76 AC017002.4-201ENST00000604721 1525 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms