Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC098614.4-201ENST00000607601 462 ntBASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 AL513477.2-201ENST00000607858 568 ntBASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 AC104010.1-201ENST00000616889 150 ntBASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 AC138649.3-201ENST00000622154 254 ntBASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 SAGE2P-201ENST00000420011 2126 ntBASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 AL161781.1-201ENST00000354277 403 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 SNORD113.2-201ENST00000364166 89 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 RNA5SP505-201ENST00000364748 108 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 RNU6-878P-201ENST00000384578 110 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 SNORD115.1-201ENST00000391109 76 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 RPS4XP9-201ENST00000405151 780 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 RPS16P5-201ENST00000406501 404 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 RN7SKP106-201ENST00000410832 272 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 RN7SKP216-201ENST00000411050 312 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 AC119751.6-201ENST00000416712 186 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 MTND1P23-201ENST00000416931 372 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 C1DP2-201ENST00000418167 426 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 AC004690.1-201ENST00000418216 328 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 GEMIN8P3-201ENST00000445417 720 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 AP000542.1-201ENST00000448473 371 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 AC005297.2-201ENST00000450430 606 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 CEACAMP6-201ENST00000452007 574 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 HMGB1P15-201ENST00000453854 435 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 AL136126.1-201ENST00000473603 402 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 AC013356.1-201ENST00000489027 564 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 RN7SKP244-201ENST00000516513 307 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 AF186190.1-201ENST00000517470 480 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 MTCYBP41-201ENST00000528913 1123 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 RPL21P5-201ENST00000554662 472 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 VN1R79P-201ENST00000593540 513 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 SNORD91B-202ENST00000608459 222 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 AC009318.4-201ENST00000620496 486 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 AC004009.2-201ENST00000623016 728 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 AC090971.4-201ENST00000560291 1800 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 FARSBP1-201ENST00000435808 1778 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 AL672167.1-205ENST00000641112 3080 ntBASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
CTHRC1Q96CG8 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 MAPK10-304ENST00000641341 3984 ntBASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTHRC1Q96CG8 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms