Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL079342.1-201ENST00000401460 267 ntBASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 CFTRP1-201ENST00000456646 183 ntBASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 AC078785.3-201ENST00000476607 425 ntBASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 AC011037.1-201ENST00000483964 558 ntBASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 AC114967.1-201ENST00000504890 259 ntBASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 AL049555.1-201ENST00000562834 1933 ntBASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 AC110754.1-201ENST00000399740 601 ntBASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 LINC01355-201ENST00000566551 5444 ntBASIC1.9□□□□□ -2.1
ALMS1Q8TCU4 RNU1-112P-201ENST00000364401 164 ntBASIC1.9□□□□□ -2.1
ALMS1Q8TCU4 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
ALMS1Q8TCU4 Y_RNA.466-201ENST00000384294 113 ntBASIC1.9□□□□□ -2.1
ALMS1Q8TCU4 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.9□□□□□ -2.1
ALMS1Q8TCU4 ISCA1P6-201ENST00000427740 390 ntBASIC1.9□□□□□ -2.1
ALMS1Q8TCU4 RPS20P22-201ENST00000473700 357 ntBASIC1.9□□□□□ -2.1
ALMS1Q8TCU4 AC108210.2-201ENST00000503681 201 ntBASIC1.9□□□□□ -2.1
ALMS1Q8TCU4 AC005351.1-201ENST00000511152 786 ntBASIC1.9□□□□□ -2.1
ALMS1Q8TCU4 AC008837.1-201ENST00000511513 412 ntBASIC1.9□□□□□ -2.1
ALMS1Q8TCU4 RNA5SP76-201ENST00000516277 87 ntBASIC1.9□□□□□ -2.1
ALMS1Q8TCU4 RN7SKP283-201ENST00000517197 270 ntBASIC1.9□□□□□ -2.1
ALMS1Q8TCU4 AL389895.1-201ENST00000554127 252 ntBASIC1.9□□□□□ -2.1
ALMS1Q8TCU4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 VTA1P1-201ENST00000414044 866 ntBASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 FAR1P1-201ENST00000427163 934 ntBASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 HMGN2P23-201ENST00000456759 269 ntBASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 snoU13.23-201ENST00000458863 104 ntBASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 AC006483.1-201ENST00000487308 313 ntBASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 AL627309.6-201ENST00000606857 840 ntBASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 AC079228.1-201ENST00000624774 1049 ntBASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 AC019080.5-201ENST00000624891 757 ntBASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 BTG3P1-201ENST00000435859 716 ntBASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 TXNP6-201ENST00000510190 310 ntBASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 AL158827.2-201ENST00000602494 330 ntBASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 AL356321.1-201ENST00000621360 228 ntBASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 AC084035.1-201ENST00000634543 607 ntBASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 AL691447.3-201ENST00000635020 330 ntBASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
ALMS1Q8TCU4 AC091152.2-201ENST00000591628 2569 ntBASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 RPL7P26-201ENST00000333817 754 ntBASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 RNA5SP508-201ENST00000411327 119 ntBASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 HMGN2P3-201ENST00000433603 273 ntBASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 HMGN2P5-201ENST00000436882 273 ntBASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 AC108860.1-201ENST00000484521 383 ntBASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 DEFB122-202ENST00000569013 197 ntBASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 AP000919.1-202ENST00000581139 1264 ntBASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 AL365361.1-201ENST00000566942 3481 ntBASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 MTCO1P14-201ENST00000441695 1559 ntBASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 RPL32P35-201ENST00000415214 394 ntBASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 OR2B8P-201ENST00000432841 938 ntBASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 AL353093.1-201ENST00000441292 436 ntBASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 AC005921.1-201ENST00000510589 286 ntBASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 AC007390.1-201ENST00000415722 356 ntBASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 RPL23AP4-201ENST00000427757 463 ntBASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 AC006539.3-201ENST00000454258 129 ntBASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 AC093278.1-201ENST00000494700 600 ntBASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC1.89□□□□□ -2.11
ALMS1Q8TCU4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms