Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC114967.1-201ENST00000504890 259 ntBASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 APOOP4-201ENST00000513530 597 ntBASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 RNU1-143P-201ENST00000516296 146 ntBASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 AC023632.4-201ENST00000517783 191 ntBASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 IGKV2D-36-201ENST00000518643 226 ntBASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 OR8I1P-201ENST00000529291 931 ntBASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 OR5B10P-201ENST00000532869 642 ntBASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 AC090312.2-201ENST00000582687 378 ntBASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 U1.23-201ENST00000610293 146 ntBASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 RNU1-68P-201ENST00000615382 146 ntBASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 U1.39-201ENST00000621562 146 ntBASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 AL392088.2-201ENST00000637607 285 ntBASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLHC1Q8NHS4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 AC092435.3-201ENST00000565538 3654 ntBASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 RNU6-374P-201ENST00000364146 108 ntBASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 RPS29P4-201ENST00000414733 161 ntBASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 RAD23BP2-201ENST00000416003 1207 ntBASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 AC245291.1-201ENST00000419501 328 ntBASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 AC012065.2-201ENST00000421295 375 ntBASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 HSFY1P1-201ENST00000423928 1178 ntBASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 BX890604.2-201ENST00000427883 474 ntBASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 RPL23AP69-201ENST00000431134 458 ntBASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 UBE2V2P3-201ENST00000433562 437 ntBASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 RABEPKP1-201ENST00000440529 1026 ntBASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 RPS15AP29-201ENST00000445539 400 ntBASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 GAPDHP39-201ENST00000481866 979 ntBASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 MTCYBP37-201ENST00000510642 1133 ntBASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 AC010306.1-201ENST00000523223 1117 ntBASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 AC018755.4-201ENST00000619715 454 ntBASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 SNORD39.4-201ENST00000620099 78 ntBASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 AC091046.2-201ENST00000620775 665 ntBASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 AL356321.1-201ENST00000621360 228 ntBASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 AC012442.3-202ENST00000636742 206 ntBASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLHC1Q8NHS4 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 MTND4P8-201ENST00000514997 1362 ntBASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 AC007342.9-201ENST00000623877 1385 ntBASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 SNORA48.7-201ENST00000391302 135 ntBASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 LINC01347-201ENST00000417964 355 ntBASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 AC006960.1-201ENST00000419980 153 ntBASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 GTF2IP23-201ENST00000423746 351 ntBASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 MTATP6P4-201ENST00000427725 675 ntBASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 YWHAZP8-201ENST00000436935 731 ntBASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 AC092641.1-201ENST00000440229 772 ntBASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 AC097499.1-201ENST00000444277 208 ntBASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 AL133547.1-201ENST00000448546 220 ntBASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 ARL4AP2-201ENST00000507378 601 ntBASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 AC105914.1-201ENST00000511798 226 ntBASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 HMGN1P15-201ENST00000513870 295 ntBASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 AC068657.1-201ENST00000520807 306 ntBASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 AC022690.1-201ENST00000526681 550 ntBASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 AP003385.6-201ENST00000531603 374 ntBASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 AC074050.1-201ENST00000563247 211 ntBASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.13□□□□□ -1.91
CLHC1Q8NHS4 AC002076.2-201ENST00000617362 122 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms