Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HERC6Q8IVU3 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.5□□□□□ -1.69
HERC6Q8IVU3 MTCO1P14-201ENST00000441695 1559 ntBASIC4.5□□□□□ -1.69
HERC6Q8IVU3 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.5□□□□□ -1.69
HERC6Q8IVU3 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.5□□□□□ -1.69
HERC6Q8IVU3 RNU6-213P-201ENST00000384051 104 ntBASIC4.5□□□□□ -1.69
HERC6Q8IVU3 RNU1-44P-201ENST00000384453 163 ntBASIC4.5□□□□□ -1.69
HERC6Q8IVU3 AC016769.3-201ENST00000396562 315 ntBASIC4.5□□□□□ -1.69
HERC6Q8IVU3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.5□□□□□ -1.69
HERC6Q8IVU3 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.5□□□□□ -1.69
HERC6Q8IVU3 VPS26BP1-201ENST00000417155 755 ntBASIC4.5□□□□□ -1.69
HERC6Q8IVU3 OFD1P18Y-201ENST00000420889 959 ntBASIC4.5□□□□□ -1.69
HERC6Q8IVU3 AL049610.1-201ENST00000423374 372 ntBASIC4.5□□□□□ -1.69
HERC6Q8IVU3 AC091390.3-201ENST00000426478 338 ntBASIC4.5□□□□□ -1.69
HERC6Q8IVU3 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.5□□□□□ -1.69
HERC6Q8IVU3 RPL7P34-201ENST00000433316 712 ntBASIC4.5□□□□□ -1.69
HERC6Q8IVU3 CKS1BP5-201ENST00000434172 273 ntBASIC4.5□□□□□ -1.69
HERC6Q8IVU3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.5□□□□□ -1.69
HERC6Q8IVU3 AL590399.6-201ENST00000446396 307 ntBASIC4.5□□□□□ -1.69
HERC6Q8IVU3 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.5□□□□□ -1.69
HERC6Q8IVU3 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.5□□□□□ -1.69
HERC6Q8IVU3 RPL38P1-201ENST00000460914 211 ntBASIC4.5□□□□□ -1.69
HERC6Q8IVU3 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.5□□□□□ -1.69
HERC6Q8IVU3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.5□□□□□ -1.69
HERC6Q8IVU3 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.5□□□□□ -1.69
HERC6Q8IVU3 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.5□□□□□ -1.69
HERC6Q8IVU3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
HERC6Q8IVU3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.5□□□□□ -1.69
HERC6Q8IVU3 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.5□□□□□ -1.69
HERC6Q8IVU3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.5□□□□□ -1.69
HERC6Q8IVU3 AC090888.2-201ENST00000559765 1144 ntBASIC4.5□□□□□ -1.69
HERC6Q8IVU3 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.5□□□□□ -1.69
HERC6Q8IVU3 MIR4999-201ENST00000585029 91 ntBASIC4.5□□□□□ -1.69
HERC6Q8IVU3 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.5□□□□□ -1.69
HERC6Q8IVU3 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.5□□□□□ -1.69
HERC6Q8IVU3 AC008751.2-201ENST00000597885 980 ntBASIC4.5□□□□□ -1.69
HERC6Q8IVU3 SRGNP1-201ENST00000603392 451 ntBASIC4.5□□□□□ -1.69
HERC6Q8IVU3 AC010680.3-201ENST00000604215 520 ntBASIC4.5□□□□□ -1.69
HERC6Q8IVU3 RNA5SP108-201ENST00000605921 117 ntBASIC4.5□□□□□ -1.69
HERC6Q8IVU3 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.5□□□□□ -1.69
HERC6Q8IVU3 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.5□□□□□ -1.69
HERC6Q8IVU3 AC019176.2-201ENST00000611579 315 ntBASIC4.5□□□□□ -1.69
HERC6Q8IVU3 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.5□□□□□ -1.69
HERC6Q8IVU3 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.5□□□□□ -1.69
HERC6Q8IVU3 AC105074.1-201ENST00000623380 3095 ntBASIC4.5□□□□□ -1.69
HERC6Q8IVU3 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HERC6Q8IVU3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
HERC6Q8IVU3 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HERC6Q8IVU3 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HERC6Q8IVU3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HERC6Q8IVU3 AL356489.2-201ENST00000566968 3528 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HERC6Q8IVU3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HERC6Q8IVU3 RNU1-108P-201ENST00000362556 161 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 SNORA4.1-201ENST00000364263 144 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 U3.15-201ENST00000365398 212 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 RNU6-253P-201ENST00000384730 105 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HERC6Q8IVU3 LAP3P1-201ENST00000403648 294 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 AL355379.1-201ENST00000405542 640 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.49□□□□□ -1.69
HERC6Q8IVU3 RN7SKP167-201ENST00000411047 285 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.49□□□□□ -1.69
HERC6Q8IVU3 HSPE1P12-201ENST00000412576 301 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 RAP1BP1-201ENST00000412709 553 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HERC6Q8IVU3 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.49□□□□□ -1.69
HERC6Q8IVU3 AC098592.1-201ENST00000419352 333 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 AC234781.2-201ENST00000426370 994 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 AL035410.1-201ENST00000427409 427 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HERC6Q8IVU3 AC073335.1-201ENST00000427776 363 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.49□□□□□ -1.69
HERC6Q8IVU3 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.49□□□□□ -1.69
HERC6Q8IVU3 AL162388.1-201ENST00000450912 352 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.49□□□□□ -1.69
HERC6Q8IVU3 USP9YP10-201ENST00000454868 628 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 AC026410.2-201ENST00000460281 156 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.49□□□□□ -1.69
HERC6Q8IVU3 RPS15AP17-201ENST00000470598 390 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 AL136126.1-201ENST00000473603 402 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 RPS4XP15-201ENST00000489210 795 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.49□□□□□ -1.69
HERC6Q8IVU3 AL139099.1-201ENST00000497398 403 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 MTCYBP17-201ENST00000503579 789 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 USP9YP5-201ENST00000511770 630 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 HIGD1AP3-201ENST00000515857 278 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 RNY4P37-201ENST00000516225 96 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 SCARNA13-201ENST00000516672 275 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.49□□□□□ -1.69
HERC6Q8IVU3 AC006064.5-201ENST00000541782 248 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 DUXAP6-201ENST00000553858 601 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.49□□□□□ -1.69
HERC6Q8IVU3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.49□□□□□ -1.69
HERC6Q8IVU3 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.49□□□□□ -1.69
HERC6Q8IVU3 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.49□□□□□ -1.69
HERC6Q8IVU3 AC005412.1-201ENST00000580812 1049 ntBASIC4.49□□□□□ -1.69
HERC6Q8IVU3 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms