Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 USP9YP4-201ENST00000424401 1745 ntBASIC5.1□□□□□ -1.59
ATG4DQ86TL0 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 AF228730.2-201ENST00000438784 848 ntBASIC5.1□□□□□ -1.59
ATG4DQ86TL0 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 RPL23AP12-201ENST00000467573 473 ntBASIC5.1□□□□□ -1.59
ATG4DQ86TL0 AC092324.1-201ENST00000468671 324 ntBASIC5.1□□□□□ -1.59
ATG4DQ86TL0 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 AC092436.1-201ENST00000506450 503 ntBASIC5.1□□□□□ -1.59
ATG4DQ86TL0 RNA5SP362-201ENST00000516048 118 ntBASIC5.1□□□□□ -1.59
ATG4DQ86TL0 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 AP003497.1-201ENST00000528472 562 ntBASIC5.1□□□□□ -1.59
ATG4DQ86TL0 AP000763.2-201ENST00000540641 163 ntBASIC5.1□□□□□ -1.59
ATG4DQ86TL0 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 OR6R2P-201ENST00000609216 300 ntBASIC5.1□□□□□ -1.59
ATG4DQ86TL0 AL121612.2-201ENST00000612261 482 ntBASIC5.1□□□□□ -1.59
ATG4DQ86TL0 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 AC243312.2-201ENST00000623340 601 ntBASIC5.1□□□□□ -1.59
ATG4DQ86TL0 AC145207.9-201ENST00000623802 325 ntBASIC5.1□□□□□ -1.59
ATG4DQ86TL0 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 AP005435.3-201ENST00000531260 3198 ntBASIC5.1□□□□□ -1.59
ATG4DQ86TL0 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 AC097504.1-201ENST00000515103 2415 ntBASIC5.09□□□□□ -1.59
ATG4DQ86TL0 MRE11P1-201ENST00000464884 2127 ntBASIC5.09□□□□□ -1.59
ATG4DQ86TL0 AC116158.1-201ENST00000560231 2129 ntBASIC5.09□□□□□ -1.59
ATG4DQ86TL0 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.09□□□□□ -1.59
ATG4DQ86TL0 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
ATG4DQ86TL0 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ATG4DQ86TL0 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.09□□□□□ -1.59
ATG4DQ86TL0 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ATG4DQ86TL0 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
ATG4DQ86TL0 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
ATG4DQ86TL0 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ATG4DQ86TL0 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ATG4DQ86TL0 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
ATG4DQ86TL0 Y_RNA.167-201ENST00000363735 109 ntBASIC5.09□□□□□ -1.59
ATG4DQ86TL0 RNU6-450P-201ENST00000364654 107 ntBASIC5.09□□□□□ -1.59
ATG4DQ86TL0 SNORA75B-201ENST00000384053 137 ntBASIC5.09□□□□□ -1.59
ATG4DQ86TL0 Y_RNA.496-201ENST00000384444 101 ntBASIC5.09□□□□□ -1.59
ATG4DQ86TL0 RNU6-33P-201ENST00000384793 107 ntBASIC5.09□□□□□ -1.59
ATG4DQ86TL0 U3.25-201ENST00000391209 220 ntBASIC5.09□□□□□ -1.59
ATG4DQ86TL0 VDAC1P9-201ENST00000412766 841 ntBASIC5.09□□□□□ -1.59
ATG4DQ86TL0 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.09□□□□□ -1.59
ATG4DQ86TL0 AC093155.2-201ENST00000420734 937 ntBASIC5.09□□□□□ -1.59
ATG4DQ86TL0 AL139396.1-201ENST00000421137 167 ntBASIC5.09□□□□□ -1.59
ATG4DQ86TL0 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.09□□□□□ -1.59
ATG4DQ86TL0 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
ATG4DQ86TL0 AL662874.1-201ENST00000426065 230 ntBASIC5.09□□□□□ -1.59
ATG4DQ86TL0 HMGB1P9-201ENST00000429856 646 ntBASIC5.09□□□□□ -1.59
ATG4DQ86TL0 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.09□□□□□ -1.59
ATG4DQ86TL0 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.09□□□□□ -1.59
ATG4DQ86TL0 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC5.09□□□□□ -1.59
ATG4DQ86TL0 MTCO3P45-201ENST00000443036 613 ntBASIC5.09□□□□□ -1.59
ATG4DQ86TL0 AC004980.3-201ENST00000447046 365 ntBASIC5.09□□□□□ -1.59
ATG4DQ86TL0 AC079168.1-201ENST00000458741 345 ntBASIC5.09□□□□□ -1.59
ATG4DQ86TL0 RN7SL197P-201ENST00000466981 299 ntBASIC5.09□□□□□ -1.59
ATG4DQ86TL0 AC008638.1-201ENST00000506035 866 ntBASIC5.09□□□□□ -1.59
ATG4DQ86TL0 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.09□□□□□ -1.59
ATG4DQ86TL0 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.09□□□□□ -1.59
ATG4DQ86TL0 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.09□□□□□ -1.59
ATG4DQ86TL0 AC128657.1-201ENST00000549459 145 ntBASIC5.09□□□□□ -1.59
ATG4DQ86TL0 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.09□□□□□ -1.59
ATG4DQ86TL0 LARP7P2-201ENST00000575306 125 ntBASIC5.09□□□□□ -1.59
ATG4DQ86TL0 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.09□□□□□ -1.59
ATG4DQ86TL0 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.09□□□□□ -1.59
ATG4DQ86TL0 MIR3672-201ENST00000584290 82 ntBASIC5.09□□□□□ -1.59
ATG4DQ86TL0 MIR4424-201ENST00000585257 86 ntBASIC5.09□□□□□ -1.59
ATG4DQ86TL0 GLUD1P4-201ENST00000590914 418 ntBASIC5.09□□□□□ -1.59
ATG4DQ86TL0 AL121992.2-201ENST00000606262 256 ntBASIC5.09□□□□□ -1.59
ATG4DQ86TL0 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.09□□□□□ -1.59
ATG4DQ86TL0 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
ATG4DQ86TL0 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.09□□□□□ -1.59
ATG4DQ86TL0 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
ATG4DQ86TL0 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
ATG4DQ86TL0 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
ATG4DQ86TL0 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
ATG4DQ86TL0 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
ATG4DQ86TL0 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
ATG4DQ86TL0 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4DQ86TL0 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms