Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 HMGN1P18-201ENST00000457642 277 ntBASIC1.82□□□□□ -2.12
CSMD3Q7Z407 ST13P14-201ENST00000474095 734 ntBASIC1.82□□□□□ -2.12
CSMD3Q7Z407 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC1.82□□□□□ -2.12
CSMD3Q7Z407 AL122125.1-201ENST00000616999 600 ntBASIC1.82□□□□□ -2.12
CSMD3Q7Z407 MIR27B-201ENST00000385129 97 ntBASIC1.82□□□□□ -2.12
CSMD3Q7Z407 ZNF603P-201ENST00000405613 487 ntBASIC1.82□□□□□ -2.12
CSMD3Q7Z407 RNU4-26P-201ENST00000410270 107 ntBASIC1.82□□□□□ -2.12
CSMD3Q7Z407 AL135786.1-201ENST00000415892 214 ntBASIC1.82□□□□□ -2.12
CSMD3Q7Z407 AP000936.3-201ENST00000438127 255 ntBASIC1.82□□□□□ -2.12
CSMD3Q7Z407 MAL2-203ENST00000534619 578 ntTSL 4 BASIC1.82□□□□□ -2.12
CSMD3Q7Z407 AL391156.1-201ENST00000554965 554 ntBASIC1.82□□□□□ -2.12
CSMD3Q7Z407 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.82□□□□□ -2.12
CSMD3Q7Z407 ISCA1P3-201ENST00000577104 373 ntBASIC1.82□□□□□ -2.12
CSMD3Q7Z407 MIR5047-201ENST00000579212 100 ntBASIC1.82□□□□□ -2.12
CSMD3Q7Z407 OR4K7P-201ENST00000580232 945 ntBASIC1.82□□□□□ -2.12
CSMD3Q7Z407 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC1.82□□□□□ -2.12
CSMD3Q7Z407 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CSMD3Q7Z407 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CSMD3Q7Z407 Y_RNA.116-201ENST00000363292 103 ntBASIC1.82□□□□□ -2.12
CSMD3Q7Z407 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.82□□□□□ -2.12
CSMD3Q7Z407 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC1.82□□□□□ -2.12
CSMD3Q7Z407 RPS20P5-201ENST00000434808 360 ntBASIC1.82□□□□□ -2.12
CSMD3Q7Z407 AC011816.1-201ENST00000441346 546 ntBASIC1.82□□□□□ -2.12
CSMD3Q7Z407 HMGN1P5-201ENST00000448591 263 ntBASIC1.82□□□□□ -2.12
CSMD3Q7Z407 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC1.82□□□□□ -2.12
CSMD3Q7Z407 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC1.82□□□□□ -2.12
CSMD3Q7Z407 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC1.82□□□□□ -2.12
CSMD3Q7Z407 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CSMD3Q7Z407 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.82□□□□□ -2.12
CSMD3Q7Z407 OR4U1P-201ENST00000554958 912 ntBASIC1.82□□□□□ -2.12
CSMD3Q7Z407 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC1.82□□□□□ -2.12
CSMD3Q7Z407 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CSMD3Q7Z407 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CSMD3Q7Z407 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC1.82□□□□□ -2.12
CSMD3Q7Z407 AC025034.2-201ENST00000623264 286 ntBASIC1.82□□□□□ -2.12
CSMD3Q7Z407 MTND4P10-201ENST00000446199 1363 ntBASIC1.82□□□□□ -2.12
CSMD3Q7Z407 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CSMD3Q7Z407 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CSMD3Q7Z407 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CSMD3Q7Z407 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC1.81□□□□□ -2.12
CSMD3Q7Z407 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CSMD3Q7Z407 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC1.81□□□□□ -2.12
CSMD3Q7Z407 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC1.81□□□□□ -2.12
CSMD3Q7Z407 HMGB1P25-201ENST00000468402 607 ntBASIC1.81□□□□□ -2.12
CSMD3Q7Z407 AC092436.1-201ENST00000506450 503 ntBASIC1.81□□□□□ -2.12
CSMD3Q7Z407 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CSMD3Q7Z407 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
CSMD3Q7Z407 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
CSMD3Q7Z407 MTCO1P22-201ENST00000604619 1360 ntBASIC1.81□□□□□ -2.12
CSMD3Q7Z407 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC1.81□□□□□ -2.12
CSMD3Q7Z407 CDC27P2-201ENST00000425026 1922 ntBASIC1.81□□□□□ -2.12
CSMD3Q7Z407 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CSMD3Q7Z407 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CSMD3Q7Z407 AL590639.1-201ENST00000456484 337 ntBASIC1.81□□□□□ -2.12
CSMD3Q7Z407 ENSA-210ENST00000503241 574 ntTSL 3 BASIC1.81□□□□□ -2.12
CSMD3Q7Z407 PRELID3BP7-201ENST00000503606 469 ntBASIC1.81□□□□□ -2.12
CSMD3Q7Z407 AC234781.5-201ENST00000508429 271 ntBASIC1.81□□□□□ -2.12
CSMD3Q7Z407 RNU4ATAC3P-201ENST00000516699 126 ntBASIC1.81□□□□□ -2.12
CSMD3Q7Z407 AL353684.1-201ENST00000622677 1120 ntBASIC1.81□□□□□ -2.12
CSMD3Q7Z407 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
CSMD3Q7Z407 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.81□□□□□ -2.12
CSMD3Q7Z407 AC093775.1-201ENST00000624154 1868 ntBASIC1.81□□□□□ -2.12
CSMD3Q7Z407 Y_RNA.338-201ENST00000365320 114 ntBASIC1.81□□□□□ -2.12
CSMD3Q7Z407 CYCSP45-201ENST00000402289 315 ntBASIC1.81□□□□□ -2.12
CSMD3Q7Z407 AL359511.1-201ENST00000402970 211 ntBASIC1.81□□□□□ -2.12
CSMD3Q7Z407 CYCSP20-201ENST00000473154 315 ntBASIC1.81□□□□□ -2.12
CSMD3Q7Z407 RPL23AP70-201ENST00000483361 460 ntBASIC1.81□□□□□ -2.12
CSMD3Q7Z407 ALDH7A1P3-201ENST00000492517 345 ntBASIC1.81□□□□□ -2.12
CSMD3Q7Z407 OR5H3P-201ENST00000502817 919 ntBASIC1.81□□□□□ -2.12
CSMD3Q7Z407 AC006445.2-201ENST00000510061 472 ntBASIC1.81□□□□□ -2.12
CSMD3Q7Z407 RN7SKP272-201ENST00000516988 232 ntBASIC1.81□□□□□ -2.12
CSMD3Q7Z407 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.81□□□□□ -2.12
CSMD3Q7Z407 AC022884.3-201ENST00000579571 248 ntBASIC1.81□□□□□ -2.12
CSMD3Q7Z407 SNORA35B-201ENST00000607417 129 ntBASIC1.81□□□□□ -2.12
CSMD3Q7Z407 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
CSMD3Q7Z407 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
CSMD3Q7Z407 MUC2-202ENST00000613187 4845 ntBASIC1.81□□□□□ -2.12
CSMD3Q7Z407 AC093831.2-201ENST00000624393 3427 ntBASIC1.81□□□□□ -2.12
CSMD3Q7Z407 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CSMD3Q7Z407 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC1.81□□□□□ -2.12
CSMD3Q7Z407 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CSMD3Q7Z407 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CSMD3Q7Z407 PTP4A1P5-201ENST00000420305 455 ntBASIC1.8□□□□□ -2.12
CSMD3Q7Z407 RN7SL442P-201ENST00000473804 320 ntBASIC1.8□□□□□ -2.12
CSMD3Q7Z407 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.8□□□□□ -2.12
CSMD3Q7Z407 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CSMD3Q7Z407 AC103798.2-201ENST00000624292 632 ntBASIC1.8□□□□□ -2.12
CSMD3Q7Z407 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC1.8□□□□□ -2.12
CSMD3Q7Z407 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC1.8□□□□□ -2.12
CSMD3Q7Z407 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
CSMD3Q7Z407 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
CSMD3Q7Z407 GTF2H2B-203ENST00000508065 1432 ntBASIC1.8□□□□□ -2.12
CSMD3Q7Z407 RNU1-35P-201ENST00000362782 153 ntBASIC1.8□□□□□ -2.12
CSMD3Q7Z407 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.8□□□□□ -2.12
CSMD3Q7Z407 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
CSMD3Q7Z407 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC1.8□□□□□ -2.12
CSMD3Q7Z407 SCGB1D5P-201ENST00000515134 247 ntBASIC1.8□□□□□ -2.12
CSMD3Q7Z407 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.8□□□□□ -2.12
CSMD3Q7Z407 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CSMD3Q7Z407 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms