Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 Y_RNA.675-201ENST00000516389 149 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 AC124947.2-202ENST00000552735 133 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 MIR4503-201ENST00000582187 83 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 FAM60CP-201ENST00000591086 664 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 AC025594.3-201ENST00000613068 790 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 SNX18P1Y-201ENST00000616231 511 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 AL731566.2-201ENST00000618971 317 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 AC021242.1-201ENST00000507315 2035 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 Z95327.2-201ENST00000414579 1873 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 ZNF519P1-201ENST00000449011 1626 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 AC026951.1-201ENST00000559530 2459 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 MTND4P35-201ENST00000604257 1375 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 OR11H4-201ENST00000315409 1082 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 Y_RNA.419-201ENST00000384041 102 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 RNU6-481P-201ENST00000384194 107 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 Y_RNA.548-201ENST00000384656 105 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 ENSAP1-201ENST00000392855 326 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 EIF4A1P3-201ENST00000411521 244 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 GTF2IP2-201ENST00000424290 697 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 AL512649.1-201ENST00000428997 581 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 MTCO3P21-201ENST00000430791 643 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 AL358472.1-201ENST00000431295 329 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 HLA-N-201ENST00000437516 135 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 RPL23AP89-201ENST00000439324 255 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 TRIM60P18-201ENST00000441518 828 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 ST13P20-201ENST00000447996 1065 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 Z99127.3-201ENST00000448158 395 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 RAD23BP3-201ENST00000454157 1152 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 RFC5P1-201ENST00000454419 874 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 CDC42P1-201ENST00000456658 548 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 AC093663.2-201ENST00000484625 313 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 AC021146.7-201ENST00000509604 775 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 HSPE1P23-201ENST00000509838 286 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 AC108064.1-201ENST00000513791 460 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 TCP11X3P-202ENST00000514289 1254 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 RNU6-1028P-201ENST00000517164 93 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 OR8I1P-201ENST00000529291 931 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 DYNLL1P4-201ENST00000549314 266 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 MIR3160-1-201ENST00000577972 85 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 MIR5684-201ENST00000585074 65 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 ZYXP1-201ENST00000617638 118 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 MTND5P26-201ENST00000426018 1752 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 AC092162.3-201ENST00000624511 1624 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 AC092435.4-201ENST00000623012 4159 ntBASIC4.31□□□□□ -1.72
BHLHA9Q7RTU4 SAMMSON-213ENST00000641336 1521 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms