Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 AC209154.1-201ENST00000582156 337 ntBASIC4.52□□□□□ -1.69
RNF220Q5VTB9 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 MIR4691-201ENST00000583764 85 ntBASIC4.52□□□□□ -1.69
RNF220Q5VTB9 AC011487.3-201ENST00000593607 453 ntBASIC4.52□□□□□ -1.69
RNF220Q5VTB9 AC079089.3-201ENST00000603094 673 ntBASIC4.52□□□□□ -1.69
RNF220Q5VTB9 SEPT7P9-203ENST00000604116 343 ntBASIC4.52□□□□□ -1.69
RNF220Q5VTB9 AL359999.1-201ENST00000604513 294 ntBASIC4.52□□□□□ -1.69
RNF220Q5VTB9 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 AL356585.4-201ENST00000623078 1229 ntBASIC4.52□□□□□ -1.69
RNF220Q5VTB9 AC079597.1-201ENST00000624306 508 ntBASIC4.52□□□□□ -1.69
RNF220Q5VTB9 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 RNA5SP428-201ENST00000365129 132 ntBASIC4.51□□□□□ -1.69
RNF220Q5VTB9 Y_RNA.359-201ENST00000365498 102 ntBASIC4.51□□□□□ -1.69
RNF220Q5VTB9 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 RNU6-1119P-201ENST00000384349 108 ntBASIC4.51□□□□□ -1.69
RNF220Q5VTB9 RNU6-171P-201ENST00000384354 107 ntBASIC4.51□□□□□ -1.69
RNF220Q5VTB9 U3.20-201ENST00000390909 217 ntBASIC4.51□□□□□ -1.69
RNF220Q5VTB9 OR6C69P-201ENST00000394268 893 ntBASIC4.51□□□□□ -1.69
RNF220Q5VTB9 RPS20P2-201ENST00000402520 389 ntBASIC4.51□□□□□ -1.69
RNF220Q5VTB9 AL583834.1-201ENST00000406943 343 ntBASIC4.51□□□□□ -1.69
RNF220Q5VTB9 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 RNU2-47P-201ENST00000410649 186 ntBASIC4.51□□□□□ -1.69
RNF220Q5VTB9 RN7SKP167-201ENST00000411047 285 ntBASIC4.51□□□□□ -1.69
RNF220Q5VTB9 USP9YP13-201ENST00000417797 480 ntBASIC4.51□□□□□ -1.69
RNF220Q5VTB9 RHOT1P3-201ENST00000436571 331 ntBASIC4.51□□□□□ -1.69
RNF220Q5VTB9 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 AC104308.1-201ENST00000454621 333 ntBASIC4.51□□□□□ -1.69
RNF220Q5VTB9 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 snoU109.1-201ENST00000459339 135 ntBASIC4.51□□□□□ -1.69
RNF220Q5VTB9 LARP1BP2-201ENST00000486594 519 ntBASIC4.51□□□□□ -1.69
RNF220Q5VTB9 RN7SL214P-201ENST00000487317 265 ntBASIC4.51□□□□□ -1.69
RNF220Q5VTB9 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 OR5M14P-201ENST00000506803 618 ntBASIC4.51□□□□□ -1.69
RNF220Q5VTB9 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 AC009101.1-201ENST00000568135 242 ntBASIC4.51□□□□□ -1.69
RNF220Q5VTB9 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 AC011451.2-201ENST00000604303 598 ntBASIC4.51□□□□□ -1.69
RNF220Q5VTB9 HMGN2P28-201ENST00000606102 262 ntBASIC4.51□□□□□ -1.69
RNF220Q5VTB9 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 AC002550.2-201ENST00000621246 394 ntBASIC4.51□□□□□ -1.69
RNF220Q5VTB9 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RNF220Q5VTB9 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 MIR921-201ENST00000401133 56 ntBASIC4.5□□□□□ -1.69
RNF220Q5VTB9 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 RNA5SP345-201ENST00000410646 108 ntBASIC4.5□□□□□ -1.69
RNF220Q5VTB9 RN7SKP235-201ENST00000410662 305 ntBASIC4.5□□□□□ -1.69
RNF220Q5VTB9 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 AF186996.5-201ENST00000418098 904 ntBASIC4.5□□□□□ -1.69
RNF220Q5VTB9 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 Z74021.1-201ENST00000423610 407 ntBASIC4.5□□□□□ -1.69
RNF220Q5VTB9 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 AC104837.2-201ENST00000427236 424 ntBASIC4.5□□□□□ -1.69
RNF220Q5VTB9 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms