Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AC008526.1-201ENST00000509149 338 ntBASIC1.61□□□□□ -2.15
UBR4Q5T4S7 FCF1P8-201ENST00000510322 597 ntBASIC1.61□□□□□ -2.15
UBR4Q5T4S7 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 AL136981.2-201ENST00000617319 734 ntBASIC1.61□□□□□ -2.15
UBR4Q5T4S7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 HMGB3P21-201ENST00000452483 547 ntBASIC1.61□□□□□ -2.15
UBR4Q5T4S7 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 UBTFL10-201ENST00000528532 562 ntBASIC1.61□□□□□ -2.15
UBR4Q5T4S7 AC025263.3-201ENST00000622965 1396 ntBASIC1.61□□□□□ -2.15
UBR4Q5T4S7 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 MTND2P9-201ENST00000422293 931 ntBASIC1.6□□□□□ -2.15
UBR4Q5T4S7 AL049610.1-201ENST00000423374 372 ntBASIC1.6□□□□□ -2.15
UBR4Q5T4S7 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 AL353705.4-201ENST00000449661 238 ntBASIC1.6□□□□□ -2.15
UBR4Q5T4S7 AC104472.2-201ENST00000469035 601 ntBASIC1.6□□□□□ -2.15
UBR4Q5T4S7 AC022447.3-201ENST00000506865 495 ntBASIC1.6□□□□□ -2.15
UBR4Q5T4S7 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 AC010503.3-201ENST00000594355 540 ntBASIC1.6□□□□□ -2.15
UBR4Q5T4S7 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 HMGN2P8-201ENST00000391458 268 ntBASIC1.6□□□□□ -2.15
UBR4Q5T4S7 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 AC108206.1-201ENST00000570186 4159 ntBASIC1.6□□□□□ -2.15
UBR4Q5T4S7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 MTND5P28-201ENST00000438005 1594 ntBASIC1.6□□□□□ -2.15
UBR4Q5T4S7 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 AL513302.2-201ENST00000562313 1842 ntBASIC1.6□□□□□ -2.15
UBR4Q5T4S7 Y_RNA.327-201ENST00000365201 102 ntBASIC1.6□□□□□ -2.15
UBR4Q5T4S7 AP000275.1-201ENST00000411943 390 ntBASIC1.6□□□□□ -2.15
UBR4Q5T4S7 RPL36AP10-201ENST00000421785 322 ntBASIC1.6□□□□□ -2.15
UBR4Q5T4S7 KCTD9P3-201ENST00000434597 1169 ntBASIC1.6□□□□□ -2.15
UBR4Q5T4S7 AL035551.1-201ENST00000446931 348 ntBASIC1.6□□□□□ -2.15
UBR4Q5T4S7 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 OR5D17P-201ENST00000531492 978 ntBASIC1.6□□□□□ -2.15
UBR4Q5T4S7 AL589994.2-201ENST00000621124 579 ntBASIC1.6□□□□□ -2.15
UBR4Q5T4S7 AC000403.1-201ENST00000613696 3585 ntBASIC1.6□□□□□ -2.15
UBR4Q5T4S7 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 AC004925.1-201ENST00000624256 2706 ntBASIC1.6□□□□□ -2.15
UBR4Q5T4S7 MIR133A2-201ENST00000347538 102 ntBASIC1.6□□□□□ -2.15
UBR4Q5T4S7 RNA5SP457-201ENST00000363657 124 ntBASIC1.6□□□□□ -2.15
UBR4Q5T4S7 SNORA51.11-201ENST00000384442 131 ntBASIC1.6□□□□□ -2.15
UBR4Q5T4S7 DNAJC19P6-201ENST00000401853 280 ntBASIC1.6□□□□□ -2.15
UBR4Q5T4S7 AC012065.2-201ENST00000421295 375 ntBASIC1.6□□□□□ -2.15
UBR4Q5T4S7 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 AC093815.1-201ENST00000508637 280 ntBASIC1.6□□□□□ -2.15
UBR4Q5T4S7 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 AC015917.1-201ENST00000579654 510 ntBASIC1.6□□□□□ -2.15
UBR4Q5T4S7 AC087588.2-201ENST00000617667 426 ntBASIC1.6□□□□□ -2.15
UBR4Q5T4S7 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
UBR4Q5T4S7 AC104623.2-202ENST00000623477 4002 ntBASIC1.6□□□□□ -2.15
UBR4Q5T4S7 WWP1P1-201ENST00000466609 2769 ntBASIC1.59□□□□□ -2.15
UBR4Q5T4S7 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
UBR4Q5T4S7 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
UBR4Q5T4S7 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
UBR4Q5T4S7 AL359643.1-201ENST00000404109 423 ntBASIC1.59□□□□□ -2.15
UBR4Q5T4S7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.59□□□□□ -2.15
UBR4Q5T4S7 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC1.59□□□□□ -2.15
UBR4Q5T4S7 AC034244.2-201ENST00000514668 858 ntBASIC1.59□□□□□ -2.15
UBR4Q5T4S7 AC011494.1-201ENST00000596454 237 ntBASIC1.59□□□□□ -2.15
UBR4Q5T4S7 AC013244.3-201ENST00000605614 388 ntBASIC1.59□□□□□ -2.15
UBR4Q5T4S7 AL157817.1-201ENST00000614264 790 ntBASIC1.59□□□□□ -2.15
UBR4Q5T4S7 AC002064.3-201ENST00000623448 346 ntBASIC1.59□□□□□ -2.15
UBR4Q5T4S7 OR1S1-201ENST00000624470 978 ntBASIC1.59□□□□□ -2.15
UBR4Q5T4S7 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC1.59□□□□□ -2.15
UBR4Q5T4S7 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC1.59□□□□□ -2.15
UBR4Q5T4S7 CUL4AP1-201ENST00000514750 1863 ntBASIC1.59□□□□□ -2.15
UBR4Q5T4S7 AC087565.3-202ENST00000642085 1603 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms