Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC104237.2-201ENST00000612456 443 ntBASIC2.31□□□□□ -2.04
LRRK2Q5S007 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.31□□□□□ -2.04
LRRK2Q5S007 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
LRRK2Q5S007 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.3□□□□□ -2.04
LRRK2Q5S007 AL359715.4-201ENST00000606629 1436 ntBASIC2.3□□□□□ -2.04
LRRK2Q5S007 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LRRK2Q5S007 SNORD114-30-201ENST00000364448 72 ntBASIC2.3□□□□□ -2.04
LRRK2Q5S007 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LRRK2Q5S007 AL356057.3-201ENST00000402607 340 ntBASIC2.3□□□□□ -2.04
LRRK2Q5S007 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
LRRK2Q5S007 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.3□□□□□ -2.04
LRRK2Q5S007 AC003982.1-202ENST00000469928 248 ntBASIC2.3□□□□□ -2.04
LRRK2Q5S007 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
LRRK2Q5S007 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.3□□□□□ -2.04
LRRK2Q5S007 AC135279.1-201ENST00000543493 504 ntBASIC2.3□□□□□ -2.04
LRRK2Q5S007 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.3□□□□□ -2.04
LRRK2Q5S007 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.3□□□□□ -2.04
LRRK2Q5S007 APOOP1-201ENST00000604695 592 ntBASIC2.3□□□□□ -2.04
LRRK2Q5S007 AL356490.1-201ENST00000623079 479 ntBASIC2.3□□□□□ -2.04
LRRK2Q5S007 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.3□□□□□ -2.04
LRRK2Q5S007 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
LRRK2Q5S007 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC2.3□□□□□ -2.04
LRRK2Q5S007 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
LRRK2Q5S007 GABRG2-229ENST00000641017 3628 ntBASIC2.3□□□□□ -2.04
LRRK2Q5S007 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LRRK2Q5S007 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
LRRK2Q5S007 AL160275.2-201ENST00000412010 394 ntBASIC2.3□□□□□ -2.04
LRRK2Q5S007 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.3□□□□□ -2.04
LRRK2Q5S007 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.3□□□□□ -2.04
LRRK2Q5S007 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC2.3□□□□□ -2.04
LRRK2Q5S007 HIGD1AP2-201ENST00000446367 280 ntBASIC2.3□□□□□ -2.04
LRRK2Q5S007 AC107222.1-201ENST00000510899 637 ntBASIC2.3□□□□□ -2.04
LRRK2Q5S007 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC2.3□□□□□ -2.04
LRRK2Q5S007 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC2.3□□□□□ -2.04
LRRK2Q5S007 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
LRRK2Q5S007 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LRRK2Q5S007 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.29□□□□□ -2.04
LRRK2Q5S007 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.29□□□□□ -2.04
LRRK2Q5S007 AC110754.1-201ENST00000399740 601 ntBASIC2.29□□□□□ -2.04
LRRK2Q5S007 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.29□□□□□ -2.04
LRRK2Q5S007 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.29□□□□□ -2.04
LRRK2Q5S007 DNAJC19P4-201ENST00000440115 345 ntBASIC2.29□□□□□ -2.04
LRRK2Q5S007 AC011753.1-201ENST00000451001 220 ntBASIC2.29□□□□□ -2.04
LRRK2Q5S007 AC021146.8-201ENST00000507455 733 ntBASIC2.29□□□□□ -2.04
LRRK2Q5S007 RNA5SP217-201ENST00000515959 91 ntBASIC2.29□□□□□ -2.04
LRRK2Q5S007 FAM60DP-201ENST00000524174 632 ntBASIC2.29□□□□□ -2.04
LRRK2Q5S007 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.29□□□□□ -2.04
LRRK2Q5S007 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.29□□□□□ -2.04
LRRK2Q5S007 MIR6779-201ENST00000617283 64 ntBASIC2.29□□□□□ -2.04
LRRK2Q5S007 DDX18P3-201ENST00000404856 2007 ntBASIC2.29□□□□□ -2.04
LRRK2Q5S007 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LRRK2Q5S007 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
LRRK2Q5S007 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
LRRK2Q5S007 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
LRRK2Q5S007 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LRRK2Q5S007 RPLP0P7-201ENST00000416050 667 ntBASIC2.29□□□□□ -2.04
LRRK2Q5S007 NPM1P49-201ENST00000448027 714 ntBASIC2.29□□□□□ -2.04
LRRK2Q5S007 RN7SL330P-201ENST00000469709 307 ntBASIC2.29□□□□□ -2.04
LRRK2Q5S007 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.29□□□□□ -2.04
LRRK2Q5S007 AC112673.1-201ENST00000513168 575 ntBASIC2.29□□□□□ -2.04
LRRK2Q5S007 RNA5SP61-201ENST00000516453 100 ntBASIC2.29□□□□□ -2.04
LRRK2Q5S007 SEC11B-201ENST00000518383 499 ntBASIC2.29□□□□□ -2.04
LRRK2Q5S007 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC2.29□□□□□ -2.04
LRRK2Q5S007 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.29□□□□□ -2.04
LRRK2Q5S007 AL391156.1-201ENST00000554965 554 ntBASIC2.29□□□□□ -2.04
LRRK2Q5S007 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.29□□□□□ -2.04
LRRK2Q5S007 AP005136.1-201ENST00000579765 429 ntBASIC2.29□□□□□ -2.04
LRRK2Q5S007 AC091903.1-201ENST00000624322 454 ntBASIC2.29□□□□□ -2.04
LRRK2Q5S007 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
LRRK2Q5S007 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
LRRK2Q5S007 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.28□□□□□ -2.04
LRRK2Q5S007 RNA5SP213-201ENST00000391031 106 ntBASIC2.28□□□□□ -2.04
LRRK2Q5S007 RN7SKP58-201ENST00000411010 305 ntBASIC2.28□□□□□ -2.04
LRRK2Q5S007 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.28□□□□□ -2.04
LRRK2Q5S007 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.28□□□□□ -2.04
LRRK2Q5S007 FCF1P1-201ENST00000432690 571 ntBASIC2.28□□□□□ -2.04
LRRK2Q5S007 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
LRRK2Q5S007 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.28□□□□□ -2.04
LRRK2Q5S007 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC2.28□□□□□ -2.04
LRRK2Q5S007 AC004696.1-201ENST00000614345 607 ntBASIC2.28□□□□□ -2.04
LRRK2Q5S007 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
LRRK2Q5S007 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
LRRK2Q5S007 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
LRRK2Q5S007 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
LRRK2Q5S007 SNORA80E-201ENST00000384744 137 ntBASIC2.28□□□□□ -2.04
LRRK2Q5S007 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC2.28□□□□□ -2.04
LRRK2Q5S007 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.28□□□□□ -2.04
LRRK2Q5S007 MTCO3P20-201ENST00000454926 688 ntBASIC2.28□□□□□ -2.04
LRRK2Q5S007 HMGN1P18-201ENST00000457642 277 ntBASIC2.28□□□□□ -2.04
LRRK2Q5S007 RPL23AP71-201ENST00000470966 469 ntBASIC2.28□□□□□ -2.04
LRRK2Q5S007 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC2.28□□□□□ -2.04
LRRK2Q5S007 RN7SKP234-201ENST00000517173 224 ntBASIC2.28□□□□□ -2.04
LRRK2Q5S007 HPRT1P3-201ENST00000539521 576 ntBASIC2.28□□□□□ -2.04
LRRK2Q5S007 MIR3199-1-201ENST00000582434 88 ntBASIC2.28□□□□□ -2.04
LRRK2Q5S007 MIR3605-201ENST00000583214 100 ntBASIC2.28□□□□□ -2.04
LRRK2Q5S007 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.28□□□□□ -2.04
LRRK2Q5S007 AC090897.3-201ENST00000636973 1157 ntBASIC2.28□□□□□ -2.04
LRRK2Q5S007 AC004520.1-201ENST00000608362 1413 ntBASIC2.28□□□□□ -2.04
LRRK2Q5S007 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
LRRK2Q5S007 AC097634.1-201ENST00000604491 2467 ntBASIC2.28□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms