Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 USP9YP9-201ENST00000429406 715 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 MTCYBP39-201ENST00000437562 491 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC38Q502W7 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC38Q502W7 HMGN2P21-201ENST00000447764 270 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC38Q502W7 BX322784.1-201ENST00000455793 1077 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 ARPC3P2-201ENST00000457786 533 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 RPS29P22-201ENST00000472363 168 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 AC006463.2-201ENST00000473326 348 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC38Q502W7 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC38Q502W7 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC38Q502W7 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC38Q502W7 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC38Q502W7 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC38Q502W7 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC38Q502W7 OR4P1P-201ENST00000530808 1136 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 AC137768.1-201ENST00000549998 553 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC38Q502W7 AC007954.1-201ENST00000554198 494 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC38Q502W7 AC009101.1-201ENST00000568135 242 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 MIR4644-201ENST00000579929 84 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC38Q502W7 RN7SL690P-201ENST00000582087 240 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 AC005255.1-201ENST00000593748 216 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 BBIP1P1-201ENST00000602999 279 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 AL390208.1-201ENST00000605885 644 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 AL161616.1-201ENST00000611867 286 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 RN7SL722P-201ENST00000617780 284 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 RN7SL565P-201ENST00000618246 284 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 AC010608.2-201ENST00000624830 470 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 AL049536.1-201ENST00000625043 744 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC38Q502W7 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CCDC38Q502W7 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.49□□□□□ -1.69
CCDC38Q502W7 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC38Q502W7 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC38Q502W7 RNU6-28P-201ENST00000362378 107 ntBASIC4.49□□□□□ -1.69
CCDC38Q502W7 SNORD113.2-201ENST00000364166 89 ntBASIC4.49□□□□□ -1.69
CCDC38Q502W7 Y_RNA.302-201ENST00000364997 102 ntBASIC4.49□□□□□ -1.69
CCDC38Q502W7 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC38Q502W7 SNORA70F-201ENST00000384142 135 ntBASIC4.49□□□□□ -1.69
CCDC38Q502W7 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC38Q502W7 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC38Q502W7 RPL23AP39-201ENST00000415533 405 ntBASIC4.49□□□□□ -1.69
CCDC38Q502W7 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CCDC38Q502W7 RPL7AP25-201ENST00000423357 805 ntBASIC4.49□□□□□ -1.69
CCDC38Q502W7 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC38Q502W7 AL590103.1-201ENST00000434488 307 ntBASIC4.49□□□□□ -1.69
CCDC38Q502W7 SDCBPP1-201ENST00000440192 890 ntBASIC4.49□□□□□ -1.69
CCDC38Q502W7 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC38Q502W7 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC38Q502W7 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC38Q502W7 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC38Q502W7 ABCF2P2-201ENST00000450549 296 ntBASIC4.49□□□□□ -1.69
CCDC38Q502W7 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC38Q502W7 HMGB3P30-201ENST00000457863 606 ntBASIC4.49□□□□□ -1.69
CCDC38Q502W7 RPL7P1-201ENST00000468161 747 ntBASIC4.49□□□□□ -1.69
CCDC38Q502W7 HMGB1P25-201ENST00000468402 607 ntBASIC4.49□□□□□ -1.69
CCDC38Q502W7 RPL7P9-201ENST00000468715 747 ntBASIC4.49□□□□□ -1.69
CCDC38Q502W7 RPL30P6-201ENST00000475925 342 ntBASIC4.49□□□□□ -1.69
CCDC38Q502W7 AC072039.1-201ENST00000477611 581 ntBASIC4.49□□□□□ -1.69
CCDC38Q502W7 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.49□□□□□ -1.69
CCDC38Q502W7 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC38Q502W7 AC024589.1-201ENST00000512207 263 ntBASIC4.49□□□□□ -1.69
CCDC38Q502W7 AC118465.1-201ENST00000513820 1271 ntBASIC4.49□□□□□ -1.69
CCDC38Q502W7 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC38Q502W7 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC38Q502W7 PHBP17-201ENST00000528576 541 ntBASIC4.49□□□□□ -1.69
CCDC38Q502W7 AC087276.1-201ENST00000529659 480 ntBASIC4.49□□□□□ -1.69
CCDC38Q502W7 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC38Q502W7 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC38Q502W7 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC38Q502W7 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC38Q502W7 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC38Q502W7 OR6C7P-201ENST00000547875 934 ntBASIC4.49□□□□□ -1.69
CCDC38Q502W7 AC008088.1-201ENST00000580993 280 ntBASIC4.49□□□□□ -1.69
CCDC38Q502W7 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC38Q502W7 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.49□□□□□ -1.69
CCDC38Q502W7 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC38Q502W7 AC072039.2-201ENST00000608883 439 ntBASIC4.49□□□□□ -1.69
CCDC38Q502W7 AC122133.1-201ENST00000613964 233 ntBASIC4.49□□□□□ -1.69
CCDC38Q502W7 AL133243.1-201ENST00000614487 366 ntBASIC4.49□□□□□ -1.69
CCDC38Q502W7 AL356596.1-201ENST00000624230 379 ntBASIC4.49□□□□□ -1.69
CCDC38Q502W7 AC099063.3-201ENST00000642066 185 ntBASIC4.49□□□□□ -1.69
CCDC38Q502W7 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC38Q502W7 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC38Q502W7 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC38Q502W7 NOL8P1-201ENST00000508336 3529 ntBASIC4.49□□□□□ -1.69
CCDC38Q502W7 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC38Q502W7 AC006971.1-201ENST00000407916 4486 ntBASIC4.49□□□□□ -1.69
CCDC38Q502W7 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC38Q502W7 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CCDC38Q502W7 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC38Q502W7 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms