Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC109809.1-201ENST00000619665 545 ntBASIC3.64□□□□□ -1.83
SCN1BQ07699 AP005264.7-201ENST00000625003 745 ntBASIC3.64□□□□□ -1.83
SCN1BQ07699 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.64□□□□□ -1.83
SCN1BQ07699 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SCN1BQ07699 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SCN1BQ07699 MAPK10-372ENST00000641954 3413 ntBASIC3.64□□□□□ -1.83
SCN1BQ07699 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
SCN1BQ07699 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SCN1BQ07699 MTND4P34-201ENST00000572715 1371 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SCN1BQ07699 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.63□□□□□ -1.83
SCN1BQ07699 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SCN1BQ07699 SNORA58B-201ENST00000364259 136 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SCN1BQ07699 TAF9BP1-201ENST00000396646 746 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 AL133270.1-201ENST00000402635 279 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 HMGB1P17-201ENST00000403495 628 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.63□□□□□ -1.83
SCN1BQ07699 PHBP16-201ENST00000446318 950 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SCN1BQ07699 PTENP1-201ENST00000447117 1215 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 RPL21P134-201ENST00000453468 483 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 DNAJC19P1-201ENST00000455312 319 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 DHFRP3-201ENST00000455595 559 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
SCN1BQ07699 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.63□□□□□ -1.83
SCN1BQ07699 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.63□□□□□ -1.83
SCN1BQ07699 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.63□□□□□ -1.83
SCN1BQ07699 AC079395.1-201ENST00000510981 262 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 AC116353.3-201ENST00000511215 249 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.63□□□□□ -1.83
SCN1BQ07699 AC109445.1-201ENST00000512356 383 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 AC006499.2-201ENST00000513470 337 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 AC092593.2-201ENST00000513866 913 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 RN7SKP157-201ENST00000516174 282 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.63□□□□□ -1.83
SCN1BQ07699 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.63□□□□□ -1.83
SCN1BQ07699 OR5AK1P-201ENST00000524837 922 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.63□□□□□ -1.83
SCN1BQ07699 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SCN1BQ07699 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.63□□□□□ -1.83
SCN1BQ07699 CR383656.7-201ENST00000548164 174 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 MTND1P8-201ENST00000571424 950 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.63□□□□□ -1.83
SCN1BQ07699 VN1R78P-201ENST00000597393 564 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 RPL12P25-202ENST00000598100 674 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 AL031176.1-201ENST00000604554 466 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 AC012409.3-201ENST00000611343 981 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 MIR6780A-201ENST00000615089 68 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
SCN1BQ07699 AC231657.1-201ENST00000624313 397 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 U6.98-201ENST00000637157 84 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SCN1BQ07699 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
SCN1BQ07699 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.63□□□□□ -1.83
SCN1BQ07699 OR5BR1P-201ENST00000524992 1330 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 SGO1P2-201ENST00000429458 1589 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 PRO1804-201ENST00000623780 2050 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 AC007256.1-201ENST00000392253 2765 ntBASIC3.63□□□□□ -1.83
SCN1BQ07699 MFSD8-216ENST00000641147 4009 ntBASIC3.62□□□□□ -1.83
SCN1BQ07699 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SCN1BQ07699 AC006504.1-201ENST00000562493 3666 ntBASIC3.62□□□□□ -1.83
SCN1BQ07699 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.62□□□□□ -1.83
SCN1BQ07699 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.62□□□□□ -1.83
SCN1BQ07699 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SCN1BQ07699 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
SCN1BQ07699 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.62□□□□□ -1.83
SCN1BQ07699 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SCN1BQ07699 RNA5SP505-201ENST00000364748 108 ntBASIC3.62□□□□□ -1.83
SCN1BQ07699 Y_RNA.311-201ENST00000365068 96 ntBASIC3.62□□□□□ -1.83
SCN1BQ07699 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.62□□□□□ -1.83
SCN1BQ07699 CYB5AP4-201ENST00000396692 399 ntBASIC3.62□□□□□ -1.83
SCN1BQ07699 RPL23AP29-201ENST00000397284 453 ntBASIC3.62□□□□□ -1.83
SCN1BQ07699 AL031679.1-201ENST00000400616 525 ntBASIC3.62□□□□□ -1.83
SCN1BQ07699 RPL30P2-201ENST00000414021 291 ntBASIC3.62□□□□□ -1.83
SCN1BQ07699 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.62□□□□□ -1.83
SCN1BQ07699 EZH2P1-201ENST00000431167 291 ntBASIC3.62□□□□□ -1.83
SCN1BQ07699 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.62□□□□□ -1.83
SCN1BQ07699 MTCYBP45-201ENST00000435243 565 ntBASIC3.62□□□□□ -1.83
SCN1BQ07699 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.62□□□□□ -1.83
SCN1BQ07699 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.62□□□□□ -1.83
SCN1BQ07699 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.62□□□□□ -1.83
SCN1BQ07699 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.62□□□□□ -1.83
SCN1BQ07699 OR9M1P-201ENST00000459641 921 ntBASIC3.62□□□□□ -1.83
SCN1BQ07699 AC097493.1-201ENST00000463958 372 ntBASIC3.62□□□□□ -1.83
SCN1BQ07699 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SCN1BQ07699 RPS29P19-201ENST00000479709 171 ntBASIC3.62□□□□□ -1.83
SCN1BQ07699 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.62□□□□□ -1.83
SCN1BQ07699 AC004069.2-201ENST00000505438 1114 ntBASIC3.62□□□□□ -1.83
SCN1BQ07699 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.62□□□□□ -1.83
SCN1BQ07699 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.62□□□□□ -1.83
SCN1BQ07699 AC111000.3-201ENST00000508057 576 ntBASIC3.62□□□□□ -1.83
SCN1BQ07699 TPT1P8-201ENST00000510120 555 ntBASIC3.62□□□□□ -1.83
SCN1BQ07699 AC105914.1-201ENST00000511798 226 ntBASIC3.62□□□□□ -1.83
SCN1BQ07699 AC026726.1-201ENST00000512859 601 ntBASIC3.62□□□□□ -1.83
SCN1BQ07699 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.62□□□□□ -1.83
SCN1BQ07699 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.62□□□□□ -1.83
SCN1BQ07699 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.62□□□□□ -1.83
SCN1BQ07699 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms