Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 RNU6-1243P-201ENST00000364028 107 ntBASIC4.31□□□□□ -1.72
HDAC4P56524 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HDAC4P56524 RNU6-921P-201ENST00000384361 107 ntBASIC4.31□□□□□ -1.72
HDAC4P56524 ENSAP1-201ENST00000392855 326 ntBASIC4.31□□□□□ -1.72
HDAC4P56524 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.31□□□□□ -1.72
HDAC4P56524 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.31□□□□□ -1.72
HDAC4P56524 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.31□□□□□ -1.72
HDAC4P56524 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.31□□□□□ -1.72
HDAC4P56524 YWHAZP7-201ENST00000436906 631 ntBASIC4.31□□□□□ -1.72
HDAC4P56524 AC006011.1-201ENST00000442758 349 ntBASIC4.31□□□□□ -1.72
HDAC4P56524 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.31□□□□□ -1.72
HDAC4P56524 RPL29P29-201ENST00000448725 423 ntBASIC4.31□□□□□ -1.72
HDAC4P56524 SNORD108-201ENST00000459332 71 ntBASIC4.31□□□□□ -1.72
HDAC4P56524 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.31□□□□□ -1.72
HDAC4P56524 RPL7P18-201ENST00000478965 734 ntBASIC4.31□□□□□ -1.72
HDAC4P56524 RPS26P15-201ENST00000488067 348 ntBASIC4.31□□□□□ -1.72
HDAC4P56524 KLRA1P-201ENST00000503499 986 ntBASIC4.31□□□□□ -1.72
HDAC4P56524 AC025554.1-201ENST00000505641 188 ntBASIC4.31□□□□□ -1.72
HDAC4P56524 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.31□□□□□ -1.72
HDAC4P56524 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.31□□□□□ -1.72
HDAC4P56524 AC105185.1-201ENST00000518705 535 ntBASIC4.31□□□□□ -1.72
HDAC4P56524 AP000790.1-201ENST00000528891 737 ntBASIC4.31□□□□□ -1.72
HDAC4P56524 OR8L1P-201ENST00000534005 955 ntBASIC4.31□□□□□ -1.72
HDAC4P56524 AC084824.1-201ENST00000550917 1005 ntBASIC4.31□□□□□ -1.72
HDAC4P56524 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.31□□□□□ -1.72
HDAC4P56524 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.31□□□□□ -1.72
HDAC4P56524 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.31□□□□□ -1.72
HDAC4P56524 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.31□□□□□ -1.72
HDAC4P56524 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.31□□□□□ -1.72
HDAC4P56524 AC007224.1-201ENST00000564410 144 ntBASIC4.31□□□□□ -1.72
HDAC4P56524 AC109446.2-201ENST00000567872 497 ntBASIC4.31□□□□□ -1.72
HDAC4P56524 RN7SL600P-201ENST00000581811 299 ntBASIC4.31□□□□□ -1.72
HDAC4P56524 VN1R82P-201ENST00000601481 356 ntBASIC4.31□□□□□ -1.72
HDAC4P56524 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.31□□□□□ -1.72
HDAC4P56524 AL109653.1-201ENST00000603091 248 ntBASIC4.31□□□□□ -1.72
HDAC4P56524 HSPE1P14-201ENST00000605812 302 ntBASIC4.31□□□□□ -1.72
HDAC4P56524 AC024941.1-201ENST00000612250 334 ntBASIC4.31□□□□□ -1.72
HDAC4P56524 AC233309.1-201ENST00000619522 751 ntBASIC4.31□□□□□ -1.72
HDAC4P56524 AL161637.1-201ENST00000622380 412 ntBASIC4.31□□□□□ -1.72
HDAC4P56524 AC098679.5-201ENST00000624394 571 ntBASIC4.31□□□□□ -1.72
HDAC4P56524 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HDAC4P56524 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HDAC4P56524 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.31□□□□□ -1.72
HDAC4P56524 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HDAC4P56524 HSPA8P1-201ENST00000425843 1833 ntBASIC4.3□□□□□ -1.72
HDAC4P56524 AC116667.1-201ENST00000604855 2072 ntBASIC4.3□□□□□ -1.72
HDAC4P56524 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HDAC4P56524 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HDAC4P56524 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HDAC4P56524 AL391994.1-201ENST00000254724 282 ntBASIC4.3□□□□□ -1.72
HDAC4P56524 Y_RNA.311-201ENST00000365068 96 ntBASIC4.3□□□□□ -1.72
HDAC4P56524 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HDAC4P56524 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.3□□□□□ -1.72
HDAC4P56524 RN7SKP33-201ENST00000410942 340 ntBASIC4.3□□□□□ -1.72
HDAC4P56524 AC073264.1-201ENST00000411508 416 ntBASIC4.3□□□□□ -1.72
HDAC4P56524 AC069218.2-201ENST00000411665 344 ntBASIC4.3□□□□□ -1.72
HDAC4P56524 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.3□□□□□ -1.72
HDAC4P56524 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.3□□□□□ -1.72
HDAC4P56524 RPS3AP9-201ENST00000417027 792 ntBASIC4.3□□□□□ -1.72
HDAC4P56524 RPL23AP38-201ENST00000423801 469 ntBASIC4.3□□□□□ -1.72
HDAC4P56524 RPL31P54-201ENST00000429803 370 ntBASIC4.3□□□□□ -1.72
HDAC4P56524 AL365396.1-201ENST00000430854 671 ntBASIC4.3□□□□□ -1.72
HDAC4P56524 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.3□□□□□ -1.72
HDAC4P56524 MTCYBP3-201ENST00000445588 1137 ntBASIC4.3□□□□□ -1.72
HDAC4P56524 NUTF2P3-201ENST00000448540 384 ntBASIC4.3□□□□□ -1.72
HDAC4P56524 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.3□□□□□ -1.72
HDAC4P56524 RPL36AP13-201ENST00000457490 317 ntBASIC4.3□□□□□ -1.72
HDAC4P56524 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.3□□□□□ -1.72
HDAC4P56524 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HDAC4P56524 PTGES3P3-201ENST00000511479 482 ntBASIC4.3□□□□□ -1.72
HDAC4P56524 AC016065.2-201ENST00000514530 444 ntBASIC4.3□□□□□ -1.72
HDAC4P56524 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.3□□□□□ -1.72
HDAC4P56524 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.3□□□□□ -1.72
HDAC4P56524 AC090888.1-201ENST00000561335 1141 ntBASIC4.3□□□□□ -1.72
HDAC4P56524 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.3□□□□□ -1.72
HDAC4P56524 MIR3939-201ENST00000582614 106 ntBASIC4.3□□□□□ -1.72
HDAC4P56524 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.3□□□□□ -1.72
HDAC4P56524 MIR4999-201ENST00000585029 91 ntBASIC4.3□□□□□ -1.72
HDAC4P56524 AC103881.1-201ENST00000603476 538 ntBASIC4.3□□□□□ -1.72
HDAC4P56524 YWHAQP7-201ENST00000603536 658 ntBASIC4.3□□□□□ -1.72
HDAC4P56524 HMGB1P50-201ENST00000605814 607 ntBASIC4.3□□□□□ -1.72
HDAC4P56524 AC091946.2-201ENST00000606105 291 ntBASIC4.3□□□□□ -1.72
HDAC4P56524 AC072039.2-201ENST00000608883 439 ntBASIC4.3□□□□□ -1.72
HDAC4P56524 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HDAC4P56524 AP005264.7-201ENST00000625003 745 ntBASIC4.3□□□□□ -1.72
HDAC4P56524 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.3□□□□□ -1.72
HDAC4P56524 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HDAC4P56524 MIR3974-201ENST00000637126 96 ntBASIC4.3□□□□□ -1.72
HDAC4P56524 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HDAC4P56524 LINC02471-203ENST00000641941 4752 ntBASIC4.3□□□□□ -1.72
HDAC4P56524 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.3□□□□□ -1.72
HDAC4P56524 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HDAC4P56524 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.29□□□□□ -1.72
HDAC4P56524 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.29□□□□□ -1.72
HDAC4P56524 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HDAC4P56524 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HDAC4P56524 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.29□□□□□ -1.72
HDAC4P56524 AL122126.1-201ENST00000546905 1318 ntBASIC4.29□□□□□ -1.72
HDAC4P56524 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HDAC4P56524 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms