Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 RN7SKP60-201ENST00000516985 239 ntBASIC3.29□□□□□ -1.88
LIM2P55344 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.29□□□□□ -1.88
LIM2P55344 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.29□□□□□ -1.88
LIM2P55344 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.29□□□□□ -1.88
LIM2P55344 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.29□□□□□ -1.88
LIM2P55344 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.29□□□□□ -1.88
LIM2P55344 OR6C73P-201ENST00000546432 358 ntBASIC3.29□□□□□ -1.88
LIM2P55344 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.29□□□□□ -1.88
LIM2P55344 AC093519.1-201ENST00000566109 298 ntBASIC3.29□□□□□ -1.88
LIM2P55344 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.29□□□□□ -1.88
LIM2P55344 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.29□□□□□ -1.88
LIM2P55344 AC110741.2-201ENST00000605278 268 ntBASIC3.29□□□□□ -1.88
LIM2P55344 AC024060.1-201ENST00000607052 494 ntBASIC3.29□□□□□ -1.88
LIM2P55344 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LIM2P55344 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.29□□□□□ -1.88
LIM2P55344 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.29□□□□□ -1.88
LIM2P55344 OR1S1-201ENST00000624470 978 ntBASIC3.29□□□□□ -1.88
LIM2P55344 AC244258.1-201ENST00000637553 1071 ntBASIC3.29□□□□□ -1.88
LIM2P55344 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.29□□□□□ -1.88
LIM2P55344 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LIM2P55344 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.29□□□□□ -1.88
LIM2P55344 PRO1804-201ENST00000623780 2050 ntBASIC3.29□□□□□ -1.88
LIM2P55344 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LIM2P55344 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.29□□□□□ -1.88
LIM2P55344 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LIM2P55344 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.29□□□□□ -1.88
LIM2P55344 AC058791.1-201ENST00000608412 3198 ntBASIC3.28□□□□□ -1.88
LIM2P55344 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LIM2P55344 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.28□□□□□ -1.88
LIM2P55344 SEPT7P7-201ENST00000420492 1301 ntBASIC3.28□□□□□ -1.88
LIM2P55344 AC117529.2-201ENST00000512159 2068 ntBASIC3.28□□□□□ -1.88
LIM2P55344 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
LIM2P55344 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LIM2P55344 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LIM2P55344 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LIM2P55344 XIAPP3-201ENST00000312918 795 ntBASIC3.28□□□□□ -1.88
LIM2P55344 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
LIM2P55344 AP002088.1-201ENST00000382740 395 ntBASIC3.28□□□□□ -1.88
LIM2P55344 SNORD116-23-201ENST00000384645 92 ntBASIC3.28□□□□□ -1.88
LIM2P55344 MIR649-201ENST00000384843 97 ntBASIC3.28□□□□□ -1.88
LIM2P55344 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
LIM2P55344 AL079342.2-201ENST00000403367 482 ntBASIC3.28□□□□□ -1.88
LIM2P55344 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.28□□□□□ -1.88
LIM2P55344 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.28□□□□□ -1.88
LIM2P55344 BTF3P8-201ENST00000414577 526 ntBASIC3.28□□□□□ -1.88
LIM2P55344 MTCYBP32-201ENST00000427945 1084 ntBASIC3.28□□□□□ -1.88
LIM2P55344 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LIM2P55344 OR51AB1P-201ENST00000429046 620 ntBASIC3.28□□□□□ -1.88
LIM2P55344 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.28□□□□□ -1.88
LIM2P55344 AC241584.1-201ENST00000438469 1241 ntBASIC3.28□□□□□ -1.88
LIM2P55344 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.28□□□□□ -1.88
LIM2P55344 AL357552.1-201ENST00000445254 415 ntBASIC3.28□□□□□ -1.88
LIM2P55344 AL358794.1-201ENST00000445689 381 ntBASIC3.28□□□□□ -1.88
LIM2P55344 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.28□□□□□ -1.88
LIM2P55344 AC007967.1-201ENST00000455422 1159 ntBASIC3.28□□□□□ -1.88
LIM2P55344 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.28□□□□□ -1.88
LIM2P55344 AC025518.1-201ENST00000479856 347 ntBASIC3.28□□□□□ -1.88
LIM2P55344 VPS26AP1-201ENST00000483197 979 ntBASIC3.28□□□□□ -1.88
LIM2P55344 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.28□□□□□ -1.88
LIM2P55344 AP000563.1-201ENST00000490865 758 ntBASIC3.28□□□□□ -1.88
LIM2P55344 CAB39P1-201ENST00000502277 460 ntBASIC3.28□□□□□ -1.88
LIM2P55344 AC020893.1-201ENST00000502452 580 ntBASIC3.28□□□□□ -1.88
LIM2P55344 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.28□□□□□ -1.88
LIM2P55344 AC006499.5-201ENST00000505037 514 ntBASIC3.28□□□□□ -1.88
LIM2P55344 AC110768.1-201ENST00000509222 400 ntBASIC3.28□□□□□ -1.88
LIM2P55344 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.28□□□□□ -1.88
LIM2P55344 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LIM2P55344 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.28□□□□□ -1.88
LIM2P55344 AC093755.1-201ENST00000512950 1023 ntBASIC3.28□□□□□ -1.88
LIM2P55344 RNU6-1231P-201ENST00000517185 103 ntBASIC3.28□□□□□ -1.88
LIM2P55344 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.28□□□□□ -1.88
LIM2P55344 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.28□□□□□ -1.88
LIM2P55344 LRRC6P1-201ENST00000532188 885 ntBASIC3.28□□□□□ -1.88
LIM2P55344 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LIM2P55344 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.28□□□□□ -1.88
LIM2P55344 AC011602.1-201ENST00000546484 331 ntBASIC3.28□□□□□ -1.88
LIM2P55344 MTCYBP27-201ENST00000555160 670 ntBASIC3.28□□□□□ -1.88
LIM2P55344 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.28□□□□□ -1.88
LIM2P55344 AC044913.1-201ENST00000557200 430 ntBASIC3.28□□□□□ -1.88
LIM2P55344 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.28□□□□□ -1.88
LIM2P55344 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.28□□□□□ -1.88
LIM2P55344 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.28□□□□□ -1.88
LIM2P55344 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.28□□□□□ -1.88
LIM2P55344 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.28□□□□□ -1.88
LIM2P55344 AP003973.1-201ENST00000604639 691 ntBASIC3.28□□□□□ -1.88
LIM2P55344 AC073387.2-201ENST00000604797 784 ntBASIC3.28□□□□□ -1.88
LIM2P55344 AC008121.2-201ENST00000614647 523 ntBASIC3.28□□□□□ -1.88
LIM2P55344 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.28□□□□□ -1.88
LIM2P55344 AC026634.1-201ENST00000634369 198 ntBASIC3.28□□□□□ -1.88
LIM2P55344 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.28□□□□□ -1.88
LIM2P55344 AL392088.2-201ENST00000637607 285 ntBASIC3.28□□□□□ -1.88
LIM2P55344 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LIM2P55344 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LIM2P55344 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
LIM2P55344 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LIM2P55344 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
LIM2P55344 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.27□□□□□ -1.89
LIM2P55344 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LIM2P55344 AL645568.2-201ENST00000432815 1337 ntBASIC3.27□□□□□ -1.89
LIM2P55344 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms