Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 RN7SL283P-201ENST00000489055 303 ntBASIC3.67□□□□□ -1.82
CLTCL1P53675 RNA5SP76-201ENST00000516277 87 ntBASIC3.67□□□□□ -1.82
CLTCL1P53675 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLTCL1P53675 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.67□□□□□ -1.82
CLTCL1P53675 AC009163.5-201ENST00000575421 637 ntBASIC3.67□□□□□ -1.82
CLTCL1P53675 FRG1DP-201ENST00000635586 771 ntBASIC3.67□□□□□ -1.82
CLTCL1P53675 MTND5P27-201ENST00000428871 1720 ntBASIC3.67□□□□□ -1.82
CLTCL1P53675 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLTCL1P53675 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CLTCL1P53675 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.67□□□□□ -1.82
CLTCL1P53675 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLTCL1P53675 AL512633.1-201ENST00000399931 655 ntBASIC3.66□□□□□ -1.82
CLTCL1P53675 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.66□□□□□ -1.82
CLTCL1P53675 SMC4P1-201ENST00000414479 527 ntBASIC3.66□□□□□ -1.82
CLTCL1P53675 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.66□□□□□ -1.82
CLTCL1P53675 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.66□□□□□ -1.82
CLTCL1P53675 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.66□□□□□ -1.82
CLTCL1P53675 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLTCL1P53675 AC092185.1-201ENST00000491371 97 ntBASIC3.66□□□□□ -1.82
CLTCL1P53675 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.66□□□□□ -1.82
CLTCL1P53675 AP000857.1-201ENST00000532151 543 ntBASIC3.66□□□□□ -1.82
CLTCL1P53675 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLTCL1P53675 AC025260.1-201ENST00000548858 430 ntBASIC3.66□□□□□ -1.82
CLTCL1P53675 AC069234.5-201ENST00000611056 416 ntBASIC3.66□□□□□ -1.82
CLTCL1P53675 AL353684.1-201ENST00000622677 1120 ntBASIC3.66□□□□□ -1.82
CLTCL1P53675 AC006020.1-201ENST00000420179 1854 ntBASIC3.66□□□□□ -1.82
CLTCL1P53675 MIR27B-201ENST00000385129 97 ntBASIC3.66□□□□□ -1.82
CLTCL1P53675 EI24P2-201ENST00000397776 1076 ntBASIC3.66□□□□□ -1.82
CLTCL1P53675 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.66□□□□□ -1.82
CLTCL1P53675 RPL23AP44-201ENST00000482216 473 ntBASIC3.66□□□□□ -1.82
CLTCL1P53675 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.66□□□□□ -1.82
CLTCL1P53675 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.66□□□□□ -1.82
CLTCL1P53675 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.66□□□□□ -1.82
CLTCL1P53675 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.66□□□□□ -1.82
CLTCL1P53675 AC025034.2-201ENST00000623264 286 ntBASIC3.66□□□□□ -1.82
CLTCL1P53675 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.66□□□□□ -1.82
CLTCL1P53675 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.65□□□□□ -1.82
CLTCL1P53675 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.65□□□□□ -1.83
CLTCL1P53675 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
CLTCL1P53675 SNORA36C-201ENST00000384289 132 ntBASIC3.65□□□□□ -1.83
CLTCL1P53675 AL359511.1-201ENST00000402970 211 ntBASIC3.65□□□□□ -1.83
CLTCL1P53675 BTF3P7-201ENST00000407097 488 ntBASIC3.65□□□□□ -1.83
CLTCL1P53675 AIMP1P1-201ENST00000418670 937 ntBASIC3.65□□□□□ -1.83
CLTCL1P53675 NANOGP5-201ENST00000424456 877 ntBASIC3.65□□□□□ -1.83
CLTCL1P53675 RPL23AP74-201ENST00000437246 471 ntBASIC3.65□□□□□ -1.83
CLTCL1P53675 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.65□□□□□ -1.83
CLTCL1P53675 AC011037.1-201ENST00000483964 558 ntBASIC3.65□□□□□ -1.83
CLTCL1P53675 AC005921.1-201ENST00000510589 286 ntBASIC3.65□□□□□ -1.83
CLTCL1P53675 RN7SKP24-201ENST00000515888 284 ntBASIC3.65□□□□□ -1.83
CLTCL1P53675 RN7SKP283-201ENST00000517197 270 ntBASIC3.65□□□□□ -1.83
CLTCL1P53675 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.65□□□□□ -1.83
CLTCL1P53675 SNORD53-201ENST00000579969 78 ntBASIC3.65□□□□□ -1.83
CLTCL1P53675 Z99129.2-201ENST00000619967 314 ntBASIC3.65□□□□□ -1.83
CLTCL1P53675 CRYM-AS1-204ENST00000637983 556 ntBASIC3.65□□□□□ -1.83
CLTCL1P53675 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLTCL1P53675 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLTCL1P53675 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLTCL1P53675 RPL9P7-201ENST00000330965 580 ntBASIC3.64□□□□□ -1.83
CLTCL1P53675 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLTCL1P53675 SNORA68.2-201ENST00000391263 128 ntBASIC3.64□□□□□ -1.83
CLTCL1P53675 RN7SL297P-201ENST00000483161 293 ntBASIC3.64□□□□□ -1.83
CLTCL1P53675 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.64□□□□□ -1.83
CLTCL1P53675 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.64□□□□□ -1.83
CLTCL1P53675 AC234781.5-201ENST00000508429 271 ntBASIC3.64□□□□□ -1.83
CLTCL1P53675 AC147055.1-201ENST00000509261 750 ntBASIC3.64□□□□□ -1.83
CLTCL1P53675 MTCYBP19-201ENST00000517463 1124 ntBASIC3.64□□□□□ -1.83
CLTCL1P53675 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.64□□□□□ -1.83
CLTCL1P53675 AC087468.1-201ENST00000604365 630 ntBASIC3.64□□□□□ -1.83
CLTCL1P53675 AC093908.1-201ENST00000623125 8092 ntBASIC3.64□□□□□ -1.83
CLTCL1P53675 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.64□□□□□ -1.83
CLTCL1P53675 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLTCL1P53675 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLTCL1P53675 RNVU1-3-201ENST00000364313 161 ntBASIC3.63□□□□□ -1.83
CLTCL1P53675 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.63□□□□□ -1.83
CLTCL1P53675 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.63□□□□□ -1.83
CLTCL1P53675 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.63□□□□□ -1.83
CLTCL1P53675 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLTCL1P53675 snoU13.26-201ENST00000459452 105 ntBASIC3.63□□□□□ -1.83
CLTCL1P53675 AC078785.3-201ENST00000476607 425 ntBASIC3.63□□□□□ -1.83
CLTCL1P53675 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.63□□□□□ -1.83
CLTCL1P53675 IGKV3-31-201ENST00000523109 329 ntBASIC3.63□□□□□ -1.83
CLTCL1P53675 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.63□□□□□ -1.83
CLTCL1P53675 AP002770.2-201ENST00000543613 532 ntBASIC3.63□□□□□ -1.83
CLTCL1P53675 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.63□□□□□ -1.83
CLTCL1P53675 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLTCL1P53675 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.63□□□□□ -1.83
CLTCL1P53675 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLTCL1P53675 AC134882.1-201ENST00000603738 1676 ntBASIC3.63□□□□□ -1.83
CLTCL1P53675 NDUFB4P5-201ENST00000415445 361 ntBASIC3.62□□□□□ -1.83
CLTCL1P53675 AC233981.1-201ENST00000423224 461 ntBASIC3.62□□□□□ -1.83
CLTCL1P53675 OR5H5P-201ENST00000503164 928 ntBASIC3.62□□□□□ -1.83
CLTCL1P53675 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.62□□□□□ -1.83
CLTCL1P53675 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC3.62□□□□□ -1.83
CLTCL1P53675 TRAV37-201ENST00000553906 342 ntBASIC3.62□□□□□ -1.83
CLTCL1P53675 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.62□□□□□ -1.83
CLTCL1P53675 AC022069.1-201ENST00000582910 658 ntBASIC3.62□□□□□ -1.83
CLTCL1P53675 SNORA35B-201ENST00000607417 129 ntBASIC3.62□□□□□ -1.83
CLTCL1P53675 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CLTCL1P53675 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLTCL1P53675 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms