Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.02□□□□□ -1.77
LIMK1P53667 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.02□□□□□ -1.77
LIMK1P53667 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.02□□□□□ -1.77
LIMK1P53667 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.02□□□□□ -1.77
LIMK1P53667 MTND1P8-201ENST00000571424 950 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.02□□□□□ -1.77
LIMK1P53667 MIR4513-201ENST00000581077 86 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 RNU4-5P-201ENST00000607255 135 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 U3.45-201ENST00000607547 219 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.02□□□□□ -1.77
LIMK1P53667 AC068722.2-201ENST00000618734 544 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 MIR7975-201ENST00000619350 68 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 AC233309.1-201ENST00000619522 751 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.02□□□□□ -1.77
LIMK1P53667 AF001550.2-201ENST00000636643 217 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 U6.98-201ENST00000637157 84 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LIMK1P53667 AC116667.1-201ENST00000604855 2072 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.02□□□□□ -1.77
LIMK1P53667 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
LIMK1P53667 AP005901.5-201ENST00000545779 1796 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
LIMK1P53667 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
LIMK1P53667 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LIMK1P53667 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
LIMK1P53667 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.01□□□□□ -1.77
LIMK1P53667 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LIMK1P53667 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
LIMK1P53667 RNU4-68P-201ENST00000364314 141 ntBASIC4.01□□□□□ -1.77
LIMK1P53667 RNU6-921P-201ENST00000384361 107 ntBASIC4.01□□□□□ -1.77
LIMK1P53667 SNORD65.1-201ENST00000390889 71 ntBASIC4.01□□□□□ -1.77
LIMK1P53667 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.01□□□□□ -1.77
LIMK1P53667 RPS3AP37-201ENST00000419176 745 ntBASIC4.01□□□□□ -1.77
LIMK1P53667 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.01□□□□□ -1.77
LIMK1P53667 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.01□□□□□ -1.77
LIMK1P53667 AC005345.1-201ENST00000431868 217 ntBASIC4.01□□□□□ -1.77
LIMK1P53667 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.01□□□□□ -1.77
LIMK1P53667 AC241584.1-201ENST00000438469 1241 ntBASIC4.01□□□□□ -1.77
LIMK1P53667 USP9YP22-201ENST00000438971 294 ntBASIC4.01□□□□□ -1.77
LIMK1P53667 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.01□□□□□ -1.77
LIMK1P53667 AL589880.1-201ENST00000448271 287 ntBASIC4.01□□□□□ -1.77
LIMK1P53667 PTGES3P5-201ENST00000455109 434 ntBASIC4.01□□□□□ -1.77
LIMK1P53667 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.01□□□□□ -1.77
LIMK1P53667 SYPL1P1-201ENST00000473622 768 ntBASIC4.01□□□□□ -1.77
LIMK1P53667 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
LIMK1P53667 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.01□□□□□ -1.77
LIMK1P53667 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LIMK1P53667 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.01□□□□□ -1.77
LIMK1P53667 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.01□□□□□ -1.77
LIMK1P53667 ARL2BPP5-201ENST00000523141 481 ntBASIC4.01□□□□□ -1.77
LIMK1P53667 AC092851.1-201ENST00000535964 478 ntBASIC4.01□□□□□ -1.77
LIMK1P53667 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.01□□□□□ -1.77
LIMK1P53667 AC006064.5-201ENST00000541782 248 ntBASIC4.01□□□□□ -1.77
LIMK1P53667 MTCYBP27-201ENST00000555160 670 ntBASIC4.01□□□□□ -1.77
LIMK1P53667 AL132857.1-201ENST00000555180 708 ntBASIC4.01□□□□□ -1.77
LIMK1P53667 GTF2IP8-201ENST00000560687 584 ntBASIC4.01□□□□□ -1.77
LIMK1P53667 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.01□□□□□ -1.77
LIMK1P53667 MIR3690-201ENST00000580266 75 ntBASIC4.01□□□□□ -1.77
LIMK1P53667 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
LIMK1P53667 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.01□□□□□ -1.77
LIMK1P53667 OR4G1P-201ENST00000588632 938 ntBASIC4.01□□□□□ -1.77
LIMK1P53667 VN1R83P-201ENST00000595685 445 ntBASIC4.01□□□□□ -1.77
LIMK1P53667 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.01□□□□□ -1.77
LIMK1P53667 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.01□□□□□ -1.77
LIMK1P53667 HMGB1P50-201ENST00000605814 607 ntBASIC4.01□□□□□ -1.77
LIMK1P53667 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.01□□□□□ -1.77
LIMK1P53667 AL138478.1-201ENST00000612252 832 ntBASIC4.01□□□□□ -1.77
LIMK1P53667 AL158163.2-201ENST00000619110 700 ntBASIC4.01□□□□□ -1.77
LIMK1P53667 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.01□□□□□ -1.77
LIMK1P53667 AC068787.1-201ENST00000623908 691 ntBASIC4.01□□□□□ -1.77
LIMK1P53667 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.01□□□□□ -1.77
LIMK1P53667 LINC02211-204ENST00000642024 1070 ntBASIC4.01□□□□□ -1.77
LIMK1P53667 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
LIMK1P53667 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LIMK1P53667 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
LIMK1P53667 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.01□□□□□ -1.77
LIMK1P53667 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LIMK1P53667 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
LIMK1P53667 ZNF37BP-203ENST00000452306 1352 ntBASIC4.01□□□□□ -1.77
LIMK1P53667 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LIMK1P53667 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4□□□□□ -1.77
LIMK1P53667 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
LIMK1P53667 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4□□□□□ -1.77
LIMK1P53667 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4□□□□□ -1.77
LIMK1P53667 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
LIMK1P53667 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4□□□□□ -1.77
LIMK1P53667 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4□□□□□ -1.77
LIMK1P53667 AL136310.1-201ENST00000404926 654 ntBASIC4□□□□□ -1.77
LIMK1P53667 TANK-206ENST00000406287 875 ntTSL 5 BASIC4□□□□□ -1.77
LIMK1P53667 AL023807.1-201ENST00000407932 359 ntBASIC4□□□□□ -1.77
LIMK1P53667 MTND4P22-201ENST00000413116 1169 ntBASIC4□□□□□ -1.77
LIMK1P53667 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4□□□□□ -1.77
LIMK1P53667 AC007435.1-201ENST00000421086 415 ntBASIC4□□□□□ -1.77
LIMK1P53667 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4□□□□□ -1.77
LIMK1P53667 RPEP2-201ENST00000432149 701 ntBASIC4□□□□□ -1.77
LIMK1P53667 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
LIMK1P53667 VDAC1P3-201ENST00000434069 851 ntBASIC4□□□□□ -1.77
LIMK1P53667 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4□□□□□ -1.77
LIMK1P53667 ELOCP13-201ENST00000443934 329 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms