Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AP006248.2-201ENST00000623309 592 ntBASIC3.19□□□□□ -1.9
NUP98P52948 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
NUP98P52948 BX005019.1-201ENST00000561881 1810 ntBASIC3.19□□□□□ -1.9
NUP98P52948 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.19□□□□□ -1.9
NUP98P52948 SNORA36C-201ENST00000384289 132 ntBASIC3.19□□□□□ -1.9
NUP98P52948 RNU6-146P-201ENST00000384602 108 ntBASIC3.19□□□□□ -1.9
NUP98P52948 MTND4LP21-201ENST00000415303 295 ntBASIC3.19□□□□□ -1.9
NUP98P52948 USP9YP20-201ENST00000419224 558 ntBASIC3.19□□□□□ -1.9
NUP98P52948 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.19□□□□□ -1.9
NUP98P52948 AL592437.1-201ENST00000443781 492 ntBASIC3.19□□□□□ -1.9
NUP98P52948 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.19□□□□□ -1.9
NUP98P52948 AL590399.6-201ENST00000446396 307 ntBASIC3.19□□□□□ -1.9
NUP98P52948 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.19□□□□□ -1.9
NUP98P52948 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.19□□□□□ -1.9
NUP98P52948 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NUP98P52948 AC011037.1-201ENST00000483964 558 ntBASIC3.19□□□□□ -1.9
NUP98P52948 AP001646.1-201ENST00000527936 915 ntBASIC3.19□□□□□ -1.9
NUP98P52948 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.19□□□□□ -1.9
NUP98P52948 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.19□□□□□ -1.9
NUP98P52948 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.19□□□□□ -1.9
NUP98P52948 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.19□□□□□ -1.9
NUP98P52948 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.19□□□□□ -1.9
NUP98P52948 AC004241.3-201ENST00000611728 517 ntBASIC3.19□□□□□ -1.9
NUP98P52948 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NUP98P52948 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NUP98P52948 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
NUP98P52948 AC093010.3-201ENST00000570269 15214 ntBASIC3.18□□□□□ -1.9
NUP98P52948 MIR1261-201ENST00000408659 82 ntBASIC3.18□□□□□ -1.9
NUP98P52948 AC080125.1-201ENST00000414888 684 ntBASIC3.18□□□□□ -1.9
NUP98P52948 AL035551.1-201ENST00000446931 348 ntBASIC3.18□□□□□ -1.9
NUP98P52948 RPL23AP14-201ENST00000468281 468 ntBASIC3.18□□□□□ -1.9
NUP98P52948 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.18□□□□□ -1.9
NUP98P52948 RNA5SP380-201ENST00000517190 98 ntBASIC3.18□□□□□ -1.9
NUP98P52948 NPM1P35-201ENST00000533043 868 ntBASIC3.18□□□□□ -1.9
NUP98P52948 PDCL2P2-201ENST00000533651 189 ntBASIC3.18□□□□□ -1.9
NUP98P52948 AC055876.1-202ENST00000567053 138 ntBASIC3.18□□□□□ -1.9
NUP98P52948 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.18□□□□□ -1.9
NUP98P52948 AC104984.5-201ENST00000586878 94 ntBASIC3.18□□□□□ -1.9
NUP98P52948 BMS1P7-201ENST00000602440 1052 ntBASIC3.18□□□□□ -1.9
NUP98P52948 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.18□□□□□ -1.9
NUP98P52948 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
NUP98P52948 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
NUP98P52948 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.18□□□□□ -1.9
NUP98P52948 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
NUP98P52948 RNVU1-3-201ENST00000364313 161 ntBASIC3.17□□□□□ -1.9
NUP98P52948 SNORD114-30-201ENST00000364448 72 ntBASIC3.17□□□□□ -1.9
NUP98P52948 ATF1P1-201ENST00000406040 927 ntBASIC3.17□□□□□ -1.9
NUP98P52948 SNORA81-201ENST00000408493 178 ntBASIC3.17□□□□□ -1.9
NUP98P52948 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.17□□□□□ -1.9
NUP98P52948 RPL7P10-201ENST00000417407 739 ntBASIC3.17□□□□□ -1.9
NUP98P52948 FTH1P1-201ENST00000437933 532 ntBASIC3.17□□□□□ -1.9
NUP98P52948 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.17□□□□□ -1.9
NUP98P52948 AP000916.1-201ENST00000533869 835 ntBASIC3.17□□□□□ -1.9
NUP98P52948 AP002770.2-201ENST00000543613 532 ntBASIC3.17□□□□□ -1.9
NUP98P52948 TUG1_1.1-201ENST00000610654 145 ntBASIC3.17□□□□□ -1.9
NUP98P52948 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NUP98P52948 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.17□□□□□ -1.9
NUP98P52948 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NUP98P52948 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NUP98P52948 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NUP98P52948 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NUP98P52948 MIR887-201ENST00000401258 79 ntBASIC3.16□□□□□ -1.9
NUP98P52948 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.16□□□□□ -1.9
NUP98P52948 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.16□□□□□ -1.9
NUP98P52948 AL662791.1-201ENST00000441992 928 ntBASIC3.16□□□□□ -1.9
NUP98P52948 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.16□□□□□ -1.9
NUP98P52948 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.16□□□□□ -1.9
NUP98P52948 KLHL2P1-201ENST00000508691 521 ntBASIC3.16□□□□□ -1.9
NUP98P52948 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.16□□□□□ -1.9
NUP98P52948 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NUP98P52948 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.16□□□□□ -1.9
NUP98P52948 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.16□□□□□ -1.9
NUP98P52948 AC012119.1-201ENST00000603184 222 ntBASIC3.16□□□□□ -1.9
NUP98P52948 CRYM-AS1-204ENST00000637983 556 ntBASIC3.16□□□□□ -1.9
NUP98P52948 GTF2H2B-203ENST00000508065 1432 ntBASIC3.16□□□□□ -1.9
NUP98P52948 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.16□□□□□ -1.9
NUP98P52948 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.16□□□□□ -1.9
NUP98P52948 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.16□□□□□ -1.9
NUP98P52948 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
NUP98P52948 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.16□□□□□ -1.9
NUP98P52948 AL513124.1-201ENST00000450410 614 ntBASIC3.16□□□□□ -1.9
NUP98P52948 AC147055.1-201ENST00000509261 750 ntBASIC3.16□□□□□ -1.9
NUP98P52948 AC006445.2-201ENST00000510061 472 ntBASIC3.16□□□□□ -1.9
NUP98P52948 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.16□□□□□ -1.9
NUP98P52948 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.16□□□□□ -1.9
NUP98P52948 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.16□□□□□ -1.9
NUP98P52948 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.16□□□□□ -1.9
NUP98P52948 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.16□□□□□ -1.9
NUP98P52948 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.16□□□□□ -1.9
NUP98P52948 AC010620.2-201ENST00000600135 313 ntBASIC3.16□□□□□ -1.9
NUP98P52948 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.16□□□□□ -1.9
NUP98P52948 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.16□□□□□ -1.9
NUP98P52948 AC092608.2-201ENST00000624427 218 ntBASIC3.16□□□□□ -1.9
NUP98P52948 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.16□□□□□ -1.9
NUP98P52948 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.16□□□□□ -1.9
NUP98P52948 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
NUP98P52948 AC021755.1-201ENST00000559747 1447 ntBASIC3.16□□□□□ -1.9
NUP98P52948 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
NUP98P52948 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NUP98P52948 ZNF826P-207ENST00000622273 1910 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms