Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.31□□□□□ -1.88
HCFC1P51610 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.31□□□□□ -1.88
HCFC1P51610 IGLVIV-53-201ENST00000520107 367 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.31□□□□□ -1.88
HCFC1P51610 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HCFC1P51610 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.31□□□□□ -1.88
HCFC1P51610 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.31□□□□□ -1.88
HCFC1P51610 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.31□□□□□ -1.88
HCFC1P51610 AC007458.1-201ENST00000542812 373 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 MTCYBP27-201ENST00000555160 670 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 MIR5195-201ENST00000583555 115 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 AC061975.8-201ENST00000587058 721 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 VN1R92P-201ENST00000598511 928 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 AC025946.2-201ENST00000603398 234 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 AC064807.4-201ENST00000607201 407 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HCFC1P51610 MIR1322-201ENST00000638013 71 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
HCFC1P51610 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
HCFC1P51610 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
HCFC1P51610 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.31□□□□□ -1.88
HCFC1P51610 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.31□□□□□ -1.88
HCFC1P51610 AC090971.4-201ENST00000560291 1800 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 AL353743.4-201ENST00000422653 1547 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HCFC1P51610 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HCFC1P51610 RNU6-413P-201ENST00000384115 107 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 Z92545.1-201ENST00000411782 234 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.31□□□□□ -1.88
HCFC1P51610 RWDD4P2-201ENST00000426392 563 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 AC005300.1-201ENST00000428401 373 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.31□□□□□ -1.88
HCFC1P51610 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.31□□□□□ -1.88
HCFC1P51610 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.31□□□□□ -1.88
HCFC1P51610 MTCYBP34-201ENST00000439552 670 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 AC092393.1-201ENST00000439625 742 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 UBE2D3P4-201ENST00000441973 436 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 RPS4XP10-201ENST00000465034 731 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.31□□□□□ -1.88
HCFC1P51610 AC017037.1-201ENST00000508460 471 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.31□□□□□ -1.88
HCFC1P51610 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.31□□□□□ -1.88
HCFC1P51610 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.31□□□□□ -1.88
HCFC1P51610 snoU109.6-201ENST00000516831 118 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HCFC1P51610 MTND2P26-201ENST00000528255 1029 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 PDCL2P2-201ENST00000533651 189 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 UBE2NP1-201ENST00000545592 458 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.31□□□□□ -1.88
HCFC1P51610 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.31□□□□□ -1.88
HCFC1P51610 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.31□□□□□ -1.88
HCFC1P51610 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.31□□□□□ -1.88
HCFC1P51610 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.31□□□□□ -1.88
HCFC1P51610 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.31□□□□□ -1.88
HCFC1P51610 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.31□□□□□ -1.88
HCFC1P51610 AF131215.7-201ENST00000602443 707 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.31□□□□□ -1.88
HCFC1P51610 NTAN1P1-201ENST00000603150 646 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.31□□□□□ -1.88
HCFC1P51610 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.31□□□□□ -1.88
HCFC1P51610 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.31□□□□□ -1.88
HCFC1P51610 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.31□□□□□ -1.88
HCFC1P51610 AC119674.1-207ENST00000641355 633 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 MTND4P34-201ENST00000572715 1371 ntBASIC3.3□□□□□ -1.88
HCFC1P51610 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.3□□□□□ -1.88
HCFC1P51610 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HCFC1P51610 AC107081.3-201ENST00000612715 2034 ntBASIC3.3□□□□□ -1.88
HCFC1P51610 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC3.3□□□□□ -1.88
HCFC1P51610 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HCFC1P51610 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HCFC1P51610 SGO1P1-201ENST00000603525 1447 ntBASIC3.3□□□□□ -1.88
HCFC1P51610 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.3□□□□□ -1.88
HCFC1P51610 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.3□□□□□ -1.88
HCFC1P51610 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HCFC1P51610 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
HCFC1P51610 RNU6-1279P-201ENST00000383917 103 ntBASIC3.3□□□□□ -1.88
HCFC1P51610 MIR93-201ENST00000385024 80 ntBASIC3.3□□□□□ -1.88
HCFC1P51610 SNORD65.1-201ENST00000390889 71 ntBASIC3.3□□□□□ -1.88
HCFC1P51610 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HCFC1P51610 AL079342.2-201ENST00000403367 482 ntBASIC3.3□□□□□ -1.88
HCFC1P51610 NPM1P34-201ENST00000428821 893 ntBASIC3.3□□□□□ -1.88
HCFC1P51610 AC092013.1-201ENST00000438795 332 ntBASIC3.3□□□□□ -1.88
HCFC1P51610 AC093155.1-201ENST00000440164 826 ntBASIC3.3□□□□□ -1.88
HCFC1P51610 MTCO2P25-201ENST00000447065 681 ntBASIC3.3□□□□□ -1.88
HCFC1P51610 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.3□□□□□ -1.88
HCFC1P51610 RPL37P3-201ENST00000456825 293 ntBASIC3.3□□□□□ -1.88
HCFC1P51610 BET1P1-201ENST00000482276 359 ntBASIC3.3□□□□□ -1.88
HCFC1P51610 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.3□□□□□ -1.88
HCFC1P51610 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.3□□□□□ -1.88
HCFC1P51610 AC021146.8-201ENST00000507455 733 ntBASIC3.3□□□□□ -1.88
HCFC1P51610 RNA5SP135-201ENST00000517019 125 ntBASIC3.3□□□□□ -1.88
HCFC1P51610 SNORA70.24-201ENST00000517233 118 ntBASIC3.3□□□□□ -1.88
HCFC1P51610 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.3□□□□□ -1.88
HCFC1P51610 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.3□□□□□ -1.88
HCFC1P51610 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HCFC1P51610 ZNF321P-202ENST00000550843 495 ntBASIC3.3□□□□□ -1.88
HCFC1P51610 AL512347.1-201ENST00000566420 503 ntBASIC3.3□□□□□ -1.88
HCFC1P51610 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.3□□□□□ -1.88
HCFC1P51610 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms