Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 U3.22-201ENST00000391120 215 ntBASIC3.49□□□□□ -1.85
CDX1P47902 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.49□□□□□ -1.85
CDX1P47902 RPL23AP26-201ENST00000412728 464 ntBASIC3.49□□□□□ -1.85
CDX1P47902 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.49□□□□□ -1.85
CDX1P47902 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.49□□□□□ -1.85
CDX1P47902 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.49□□□□□ -1.85
CDX1P47902 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.49□□□□□ -1.85
CDX1P47902 MTCO2P21-201ENST00000419780 677 ntBASIC3.49□□□□□ -1.85
CDX1P47902 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.49□□□□□ -1.85
CDX1P47902 C4BPAP2-201ENST00000428434 478 ntBASIC3.49□□□□□ -1.85
CDX1P47902 RPL23AP25-201ENST00000430973 463 ntBASIC3.49□□□□□ -1.85
CDX1P47902 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.49□□□□□ -1.85
CDX1P47902 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.49□□□□□ -1.85
CDX1P47902 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.49□□□□□ -1.85
CDX1P47902 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.49□□□□□ -1.85
CDX1P47902 TPTE2P3-201ENST00000441562 1189 ntBASIC3.49□□□□□ -1.85
CDX1P47902 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.49□□□□□ -1.85
CDX1P47902 RPL23AP43-201ENST00000446445 471 ntBASIC3.49□□□□□ -1.85
CDX1P47902 ARPC3P5-201ENST00000448802 534 ntBASIC3.49□□□□□ -1.85
CDX1P47902 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.49□□□□□ -1.85
CDX1P47902 RPL23AP24-201ENST00000458203 385 ntBASIC3.49□□□□□ -1.85
CDX1P47902 RNU7-136P-201ENST00000458819 69 ntBASIC3.49□□□□□ -1.85
CDX1P47902 RPL21P126-201ENST00000470049 478 ntBASIC3.49□□□□□ -1.85
CDX1P47902 RN7SL585P-201ENST00000470538 280 ntBASIC3.49□□□□□ -1.85
CDX1P47902 AC069499.1-201ENST00000489433 509 ntBASIC3.49□□□□□ -1.85
CDX1P47902 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.49□□□□□ -1.85
CDX1P47902 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.49□□□□□ -1.85
CDX1P47902 AC004062.1-201ENST00000509926 645 ntBASIC3.49□□□□□ -1.85
CDX1P47902 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.49□□□□□ -1.85
CDX1P47902 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.49□□□□□ -1.85
CDX1P47902 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.49□□□□□ -1.85
CDX1P47902 PDCL2P2-201ENST00000533651 189 ntBASIC3.49□□□□□ -1.85
CDX1P47902 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.49□□□□□ -1.85
CDX1P47902 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDX1P47902 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.49□□□□□ -1.85
CDX1P47902 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
CDX1P47902 CYCSP2-201ENST00000558168 301 ntBASIC3.49□□□□□ -1.85
CDX1P47902 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDX1P47902 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.49□□□□□ -1.85
CDX1P47902 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.49□□□□□ -1.85
CDX1P47902 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.49□□□□□ -1.85
CDX1P47902 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.49□□□□□ -1.85
CDX1P47902 BNIP3P38-201ENST00000601117 544 ntBASIC3.49□□□□□ -1.85
CDX1P47902 AC007687.1-201ENST00000602704 304 ntBASIC3.49□□□□□ -1.85
CDX1P47902 AC012669.1-201ENST00000603209 283 ntBASIC3.49□□□□□ -1.85
CDX1P47902 AL031281.1-201ENST00000604049 488 ntBASIC3.49□□□□□ -1.85
CDX1P47902 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDX1P47902 AC093424.1-201ENST00000604999 338 ntBASIC3.49□□□□□ -1.85
CDX1P47902 AL590282.1-201ENST00000610379 1136 ntBASIC3.49□□□□□ -1.85
CDX1P47902 AC005962.2-201ENST00000611427 652 ntBASIC3.49□□□□□ -1.85
CDX1P47902 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDX1P47902 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDX1P47902 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CDX1P47902 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CDX1P47902 AC079228.1-201ENST00000624774 1049 ntBASIC3.49□□□□□ -1.85
CDX1P47902 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.49□□□□□ -1.85
CDX1P47902 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDX1P47902 AL049780.3-201ENST00000624612 1583 ntBASIC3.49□□□□□ -1.85
CDX1P47902 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDX1P47902 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDX1P47902 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.49□□□□□ -1.85
CDX1P47902 USP8P1-201ENST00000494673 3183 ntBASIC3.49□□□□□ -1.85
CDX1P47902 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDX1P47902 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDX1P47902 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.48□□□□□ -1.85
CDX1P47902 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
CDX1P47902 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.48□□□□□ -1.85
CDX1P47902 Z82217.1-201ENST00000625157 8149 ntBASIC3.48□□□□□ -1.85
CDX1P47902 AL022578.1-201ENST00000439330 1433 ntBASIC3.48□□□□□ -1.85
CDX1P47902 RPL23AP57-201ENST00000332361 466 ntBASIC3.48□□□□□ -1.85
CDX1P47902 RNU6-28P-201ENST00000362378 107 ntBASIC3.48□□□□□ -1.85
CDX1P47902 MIR659-201ENST00000384963 97 ntBASIC3.48□□□□□ -1.85
CDX1P47902 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.48□□□□□ -1.85
CDX1P47902 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.48□□□□□ -1.85
CDX1P47902 TPMTP2-201ENST00000414372 726 ntBASIC3.48□□□□□ -1.85
CDX1P47902 AC245052.5-201ENST00000416320 649 ntBASIC3.48□□□□□ -1.85
CDX1P47902 MTCYBP38-201ENST00000417160 1123 ntBASIC3.48□□□□□ -1.85
CDX1P47902 AC127526.1-201ENST00000417526 366 ntBASIC3.48□□□□□ -1.85
CDX1P47902 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.48□□□□□ -1.85
CDX1P47902 AL953862.1-201ENST00000423016 168 ntBASIC3.48□□□□□ -1.85
CDX1P47902 AC007742.1-201ENST00000425789 329 ntBASIC3.48□□□□□ -1.85
CDX1P47902 HMGB3P5-201ENST00000428894 612 ntBASIC3.48□□□□□ -1.85
CDX1P47902 MTND1P32-201ENST00000433043 938 ntBASIC3.48□□□□□ -1.85
CDX1P47902 VDAC1P3-201ENST00000434069 851 ntBASIC3.48□□□□□ -1.85
CDX1P47902 AL132765.1-201ENST00000434165 553 ntBASIC3.48□□□□□ -1.85
CDX1P47902 ELOCP26-201ENST00000436067 329 ntBASIC3.48□□□□□ -1.85
CDX1P47902 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.48□□□□□ -1.85
CDX1P47902 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.48□□□□□ -1.85
CDX1P47902 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.48□□□□□ -1.85
CDX1P47902 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.48□□□□□ -1.85
CDX1P47902 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.48□□□□□ -1.85
CDX1P47902 RPL7P52-201ENST00000449200 742 ntBASIC3.48□□□□□ -1.85
CDX1P47902 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.48□□□□□ -1.85
CDX1P47902 HMGB1P15-201ENST00000453854 435 ntBASIC3.48□□□□□ -1.85
CDX1P47902 RPL9P32-201ENST00000464118 620 ntBASIC3.48□□□□□ -1.85
CDX1P47902 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
CDX1P47902 RN7SL860P-201ENST00000473738 223 ntBASIC3.48□□□□□ -1.85
CDX1P47902 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.48□□□□□ -1.85
CDX1P47902 TMED11P-201ENST00000479478 690 ntBASIC3.48□□□□□ -1.85
CDX1P47902 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms