Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SLC1A1P43005 AC110794.1-201ENST00000505816 425 ntBASIC3.33□□□□□ -1.88
SLC1A1P43005 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.33□□□□□ -1.88
SLC1A1P43005 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.33□□□□□ -1.88
SLC1A1P43005 RNU6-362P-201ENST00000516736 90 ntBASIC3.33□□□□□ -1.88
SLC1A1P43005 AC023632.4-201ENST00000517783 191 ntBASIC3.33□□□□□ -1.88
SLC1A1P43005 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC1A1P43005 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC1A1P43005 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.33□□□□□ -1.88
SLC1A1P43005 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC1A1P43005 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC1A1P43005 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC1A1P43005 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.33□□□□□ -1.88
SLC1A1P43005 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC1A1P43005 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.33□□□□□ -1.88
SLC1A1P43005 AC012467.1-201ENST00000607740 256 ntBASIC3.33□□□□□ -1.88
SLC1A1P43005 AL118508.4-201ENST00000624142 1176 ntBASIC3.33□□□□□ -1.88
SLC1A1P43005 AC092608.3-201ENST00000625017 386 ntBASIC3.33□□□□□ -1.88
SLC1A1P43005 AC093908.1-201ENST00000623125 8092 ntBASIC3.33□□□□□ -1.88
SLC1A1P43005 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SLC1A1P43005 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.33□□□□□ -1.88
SLC1A1P43005 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.33□□□□□ -1.88
SLC1A1P43005 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SLC1A1P43005 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SLC1A1P43005 OR1S2-201ENST00000302592 978 ntBASIC3.32□□□□□ -1.88
SLC1A1P43005 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
SLC1A1P43005 RNU6-1339P-201ENST00000363574 91 ntBASIC3.32□□□□□ -1.88
SLC1A1P43005 RNU6-1243P-201ENST00000364028 107 ntBASIC3.32□□□□□ -1.88
SLC1A1P43005 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SLC1A1P43005 OR6K3-202ENST00000368146 996 ntBASIC3.32□□□□□ -1.88
SLC1A1P43005 PTMAP2-201ENST00000397627 327 ntBASIC3.32□□□□□ -1.88
SLC1A1P43005 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.32□□□□□ -1.88
SLC1A1P43005 AC005517.2-201ENST00000424673 553 ntBASIC3.32□□□□□ -1.88
SLC1A1P43005 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.32□□□□□ -1.88
SLC1A1P43005 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.32□□□□□ -1.88
SLC1A1P43005 RPL36P19-201ENST00000430744 301 ntBASIC3.32□□□□□ -1.88
SLC1A1P43005 AL353705.1-201ENST00000433468 480 ntBASIC3.32□□□□□ -1.88
SLC1A1P43005 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SLC1A1P43005 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.32□□□□□ -1.88
SLC1A1P43005 FABP5P3-201ENST00000437960 408 ntBASIC3.32□□□□□ -1.88
SLC1A1P43005 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.32□□□□□ -1.88
SLC1A1P43005 RPL6P5-201ENST00000445678 828 ntBASIC3.32□□□□□ -1.88
SLC1A1P43005 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.32□□□□□ -1.88
SLC1A1P43005 AC015724.1-201ENST00000478577 156 ntBASIC3.32□□□□□ -1.88
SLC1A1P43005 NCOR1P1-202ENST00000486162 291 ntBASIC3.32□□□□□ -1.88
SLC1A1P43005 POU5F1P7-201ENST00000508759 541 ntBASIC3.32□□□□□ -1.88
SLC1A1P43005 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.32□□□□□ -1.88
SLC1A1P43005 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.32□□□□□ -1.88
SLC1A1P43005 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.32□□□□□ -1.88
SLC1A1P43005 RPL21P12-201ENST00000559810 515 ntBASIC3.32□□□□□ -1.88
SLC1A1P43005 MIR4504-201ENST00000577413 92 ntBASIC3.32□□□□□ -1.88
SLC1A1P43005 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.32□□□□□ -1.88
SLC1A1P43005 AC079880.2-201ENST00000603790 1213 ntBASIC3.32□□□□□ -1.88
SLC1A1P43005 AC005156.1-201ENST00000613371 573 ntBASIC3.32□□□□□ -1.88
SLC1A1P43005 AC003001.2-201ENST00000616294 831 ntBASIC3.32□□□□□ -1.88
SLC1A1P43005 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SLC1A1P43005 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SLC1A1P43005 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SLC1A1P43005 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SLC1A1P43005 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
SLC1A1P43005 SNORA31-201ENST00000362607 130 ntBASIC3.31□□□□□ -1.88
SLC1A1P43005 ATF1P1-201ENST00000406040 927 ntBASIC3.31□□□□□ -1.88
SLC1A1P43005 SNORA11C-201ENST00000408532 129 ntBASIC3.31□□□□□ -1.88
SLC1A1P43005 AL158825.1-201ENST00000414735 521 ntBASIC3.31□□□□□ -1.88
SLC1A1P43005 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC1A1P43005 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC1A1P43005 AC073310.1-201ENST00000423226 1033 ntBASIC3.31□□□□□ -1.88
SLC1A1P43005 DPPA2P1-201ENST00000428060 556 ntBASIC3.31□□□□□ -1.88
SLC1A1P43005 MTCO3P43-201ENST00000440974 771 ntBASIC3.31□□□□□ -1.88
SLC1A1P43005 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.31□□□□□ -1.88
SLC1A1P43005 UQCRHP3-201ENST00000451503 251 ntBASIC3.31□□□□□ -1.88
SLC1A1P43005 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC1A1P43005 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC1A1P43005 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SLC1A1P43005 AF279873.1-201ENST00000523393 313 ntBASIC3.31□□□□□ -1.88
SLC1A1P43005 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.31□□□□□ -1.88
SLC1A1P43005 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.31□□□□□ -1.88
SLC1A1P43005 AC010198.2-201ENST00000550612 259 ntBASIC3.31□□□□□ -1.88
SLC1A1P43005 AC011611.1-201ENST00000552179 197 ntBASIC3.31□□□□□ -1.88
SLC1A1P43005 EIF5A2P1-201ENST00000564027 460 ntBASIC3.31□□□□□ -1.88
SLC1A1P43005 MTCYBP28-201ENST00000566728 1132 ntBASIC3.31□□□□□ -1.88
SLC1A1P43005 CKS1BP3-201ENST00000600888 237 ntBASIC3.31□□□□□ -1.88
SLC1A1P43005 AL163051.2-201ENST00000618976 735 ntBASIC3.31□□□□□ -1.88
SLC1A1P43005 AC073569.3-201ENST00000619055 682 ntBASIC3.31□□□□□ -1.88
SLC1A1P43005 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC1A1P43005 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
SLC1A1P43005 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC1A1P43005 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SLC1A1P43005 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.3□□□□□ -1.88
SLC1A1P43005 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.3□□□□□ -1.88
SLC1A1P43005 MTND5P28-201ENST00000438005 1594 ntBASIC3.3□□□□□ -1.88
SLC1A1P43005 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SLC1A1P43005 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
SLC1A1P43005 Y_RNA.126-201ENST00000363382 111 ntBASIC3.3□□□□□ -1.88
SLC1A1P43005 RNA5SP189-201ENST00000364920 115 ntBASIC3.3□□□□□ -1.88
SLC1A1P43005 MIR490-201ENST00000384865 128 ntBASIC3.3□□□□□ -1.88
SLC1A1P43005 MIR200C-201ENST00000384980 68 ntBASIC3.3□□□□□ -1.88
SLC1A1P43005 AC025750.1-201ENST00000399891 379 ntBASIC3.3□□□□□ -1.88
SLC1A1P43005 UBE2V1P15-201ENST00000407776 448 ntBASIC3.3□□□□□ -1.88
SLC1A1P43005 AC245054.2-201ENST00000415639 319 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms