Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 MTND2P38-201ENST00000522536 667 ntBASIC3.89□□□□□ -1.79
HNF4AP41235 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.89□□□□□ -1.79
HNF4AP41235 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.89□□□□□ -1.79
HNF4AP41235 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.89□□□□□ -1.79
HNF4AP41235 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.89□□□□□ -1.79
HNF4AP41235 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.89□□□□□ -1.79
HNF4AP41235 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.89□□□□□ -1.79
HNF4AP41235 AC141257.3-201ENST00000572906 215 ntBASIC3.89□□□□□ -1.79
HNF4AP41235 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.89□□□□□ -1.79
HNF4AP41235 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.89□□□□□ -1.79
HNF4AP41235 XIAPP1-201ENST00000603162 600 ntBASIC3.89□□□□□ -1.79
HNF4AP41235 ELOCP35-201ENST00000604289 336 ntBASIC3.89□□□□□ -1.79
HNF4AP41235 AL163642.2-201ENST00000604722 1019 ntBASIC3.89□□□□□ -1.79
HNF4AP41235 AP003392.5-201ENST00000607857 415 ntBASIC3.89□□□□□ -1.79
HNF4AP41235 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.89□□□□□ -1.79
HNF4AP41235 AC109454.4-201ENST00000623411 649 ntBASIC3.89□□□□□ -1.79
HNF4AP41235 AC019226.2-201ENST00000625973 424 ntBASIC3.89□□□□□ -1.79
HNF4AP41235 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HNF4AP41235 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HNF4AP41235 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HNF4AP41235 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.89□□□□□ -1.79
HNF4AP41235 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
HNF4AP41235 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
HNF4AP41235 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.88□□□□□ -1.79
HNF4AP41235 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
HNF4AP41235 NUP58P1-201ENST00000502546 1738 ntBASIC3.88□□□□□ -1.79
HNF4AP41235 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
HNF4AP41235 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
HNF4AP41235 DEFB109C-201ENST00000382575 264 ntBASIC3.88□□□□□ -1.79
HNF4AP41235 DEFB109B-201ENST00000382656 264 ntBASIC3.88□□□□□ -1.79
HNF4AP41235 MIR217-201ENST00000384817 110 ntBASIC3.88□□□□□ -1.79
HNF4AP41235 MIR513B-201ENST00000385136 84 ntBASIC3.88□□□□□ -1.79
HNF4AP41235 RNU6-1242P-201ENST00000391052 103 ntBASIC3.88□□□□□ -1.79
HNF4AP41235 AL022722.2-201ENST00000402519 180 ntBASIC3.88□□□□□ -1.79
HNF4AP41235 RPL23AP47-201ENST00000408017 460 ntBASIC3.88□□□□□ -1.79
HNF4AP41235 AC007390.1-201ENST00000415722 356 ntBASIC3.88□□□□□ -1.79
HNF4AP41235 MTND4P3-201ENST00000417829 541 ntBASIC3.88□□□□□ -1.79
HNF4AP41235 KRR1P1-201ENST00000419430 803 ntBASIC3.88□□□□□ -1.79
HNF4AP41235 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.88□□□□□ -1.79
HNF4AP41235 SETP5-201ENST00000437270 562 ntBASIC3.88□□□□□ -1.79
HNF4AP41235 AC092393.1-201ENST00000439625 742 ntBASIC3.88□□□□□ -1.79
HNF4AP41235 Z73417.1-201ENST00000447373 778 ntBASIC3.88□□□□□ -1.79
HNF4AP41235 AC244505.3-201ENST00000454598 187 ntBASIC3.88□□□□□ -1.79
HNF4AP41235 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
HNF4AP41235 RPL21P131-201ENST00000497298 483 ntBASIC3.88□□□□□ -1.79
HNF4AP41235 RPL7P47-201ENST00000497299 556 ntBASIC3.88□□□□□ -1.79
HNF4AP41235 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.88□□□□□ -1.79
HNF4AP41235 AC109458.1-201ENST00000508858 316 ntBASIC3.88□□□□□ -1.79
HNF4AP41235 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HNF4AP41235 AC008837.1-201ENST00000511513 412 ntBASIC3.88□□□□□ -1.79
HNF4AP41235 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.88□□□□□ -1.79
HNF4AP41235 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.88□□□□□ -1.79
HNF4AP41235 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.88□□□□□ -1.79
HNF4AP41235 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.88□□□□□ -1.79
HNF4AP41235 AC104417.1-201ENST00000523974 751 ntBASIC3.88□□□□□ -1.79
HNF4AP41235 AC023538.1-201ENST00000534576 736 ntBASIC3.88□□□□□ -1.79
HNF4AP41235 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.88□□□□□ -1.79
HNF4AP41235 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.88□□□□□ -1.79
HNF4AP41235 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.88□□□□□ -1.79
HNF4AP41235 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.88□□□□□ -1.79
HNF4AP41235 AC107982.3-201ENST00000584957 985 ntBASIC3.88□□□□□ -1.79
HNF4AP41235 MRPS35P3-201ENST00000603189 709 ntBASIC3.88□□□□□ -1.79
HNF4AP41235 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.88□□□□□ -1.79
HNF4AP41235 AC123767.1-202ENST00000620407 817 ntBASIC3.88□□□□□ -1.79
HNF4AP41235 AP002791.1-201ENST00000623291 381 ntBASIC3.88□□□□□ -1.79
HNF4AP41235 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.88□□□□□ -1.79
HNF4AP41235 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HNF4AP41235 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.88□□□□□ -1.79
HNF4AP41235 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
HNF4AP41235 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HNF4AP41235 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
HNF4AP41235 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HNF4AP41235 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
HNF4AP41235 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HNF4AP41235 RNU6-1066P-201ENST00000363573 105 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 SNORA70.2-201ENST00000364506 135 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 SNORA51.6-201ENST00000384151 125 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 RNU4-6P-201ENST00000410804 122 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 TPT1P2-201ENST00000413105 503 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 BOLA3P4-201ENST00000418151 400 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 AC092634.6-201ENST00000418558 192 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.87□□□□□ -1.79
HNF4AP41235 Z93242.1-201ENST00000427102 353 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 CETN4P-201ENST00000432407 469 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 ATP5HP2-201ENST00000433885 485 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 BMS1P19-201ENST00000433925 393 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.87□□□□□ -1.79
HNF4AP41235 AL356535.1-201ENST00000440335 398 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 CR769776.1-201ENST00000441254 787 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 ZNF886P-201ENST00000450781 723 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 MRPL42P4-201ENST00000453267 443 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 PTGES3P5-201ENST00000455109 434 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 PLGLA-201ENST00000465668 449 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 RN7SL860P-201ENST00000473738 223 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 DYNLL1P6-201ENST00000503440 264 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.87□□□□□ -1.79
HNF4AP41235 AC093534.1-201ENST00000504977 132 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.87□□□□□ -1.79
HNF4AP41235 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms