Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 EIF1P6-201ENST00000600054 334 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.34□□□□□ -1.71
HOXA11P31270 AL451074.6-201ENST00000608512 729 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 AL031666.3-201ENST00000609320 1006 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA11P31270 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA11P31270 AC004825.2-201ENST00000616634 455 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA11P31270 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXA11P31270 AC039056.2-201ENST00000622261 511 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.71
HOXA11P31270 FP236240.3-201ENST00000623061 327 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXA11P31270 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXA11P31270 AC017104.4-201ENST00000636283 1592 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA11P31270 CR381670.1-201ENST00000624291 1693 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA11P31270 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HOXA11P31270 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.34□□□□□ -1.72
HOXA11P31270 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
HOXA11P31270 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXA11P31270 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
HOXA11P31270 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXA11P31270 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXA11P31270 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
HOXA11P31270 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXA11P31270 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXA11P31270 AC006366.1-201ENST00000422002 759 ntBASIC4.33□□□□□ -1.72
HOXA11P31270 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA11P31270 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA11P31270 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.33□□□□□ -1.72
HOXA11P31270 AL445584.1-201ENST00000431451 330 ntBASIC4.33□□□□□ -1.72
HOXA11P31270 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXA11P31270 AC234064.1-201ENST00000436312 247 ntBASIC4.33□□□□□ -1.72
HOXA11P31270 HLA-N-201ENST00000437516 135 ntBASIC4.33□□□□□ -1.72
HOXA11P31270 USP9YP22-201ENST00000438971 294 ntBASIC4.33□□□□□ -1.72
HOXA11P31270 RPS7P5-201ENST00000441482 581 ntBASIC4.33□□□□□ -1.72
HOXA11P31270 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.33□□□□□ -1.72
HOXA11P31270 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA11P31270 USP9YP10-201ENST00000454868 628 ntBASIC4.33□□□□□ -1.72
HOXA11P31270 AC107401.1-201ENST00000503426 685 ntBASIC4.33□□□□□ -1.72
HOXA11P31270 USP9YP5-201ENST00000511770 630 ntBASIC4.33□□□□□ -1.72
HOXA11P31270 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA11P31270 RN7SKP234-201ENST00000517173 224 ntBASIC4.33□□□□□ -1.72
HOXA11P31270 HMGB1P23-201ENST00000518743 568 ntBASIC4.33□□□□□ -1.72
HOXA11P31270 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA11P31270 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA11P31270 AC092851.1-201ENST00000535964 478 ntBASIC4.33□□□□□ -1.72
HOXA11P31270 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA11P31270 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXA11P31270 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.33□□□□□ -1.72
HOXA11P31270 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.33□□□□□ -1.72
HOXA11P31270 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA11P31270 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA11P31270 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXA11P31270 CYP4A43P-201ENST00000568156 121 ntBASIC4.33□□□□□ -1.72
HOXA11P31270 AGGF1P4-201ENST00000568249 801 ntBASIC4.33□□□□□ -1.72
HOXA11P31270 ZNF415P1-201ENST00000582279 1166 ntBASIC4.33□□□□□ -1.72
HOXA11P31270 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA11P31270 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXA11P31270 NTAN1P1-201ENST00000603150 646 ntBASIC4.33□□□□□ -1.72
HOXA11P31270 AL021997.1-201ENST00000605757 193 ntBASIC4.33□□□□□ -1.72
HOXA11P31270 RN7SKP299-201ENST00000606679 301 ntBASIC4.33□□□□□ -1.72
HOXA11P31270 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.33□□□□□ -1.72
HOXA11P31270 AC006133.1-201ENST00000617106 264 ntBASIC4.33□□□□□ -1.72
HOXA11P31270 AC121761.2-201ENST00000617300 689 ntBASIC4.33□□□□□ -1.72
HOXA11P31270 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXA11P31270 AF246928.1-201ENST00000623768 87 ntBASIC4.33□□□□□ -1.72
HOXA11P31270 AC092656.1-203ENST00000624134 423 ntBASIC4.33□□□□□ -1.72
HOXA11P31270 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXA11P31270 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HOXA11P31270 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HOXA11P31270 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXA11P31270 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXA11P31270 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXA11P31270 MTND4P34-201ENST00000572715 1371 ntBASIC4.32□□□□□ -1.72
HOXA11P31270 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
HOXA11P31270 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXA11P31270 RNA5SP502-201ENST00000362694 119 ntBASIC4.32□□□□□ -1.72
HOXA11P31270 RNU6-1339P-201ENST00000363574 91 ntBASIC4.32□□□□□ -1.72
HOXA11P31270 RNU6-356P-201ENST00000384140 107 ntBASIC4.32□□□□□ -1.72
HOXA11P31270 RNU6-1200P-201ENST00000384162 107 ntBASIC4.32□□□□□ -1.72
HOXA11P31270 RNA5SP80-201ENST00000410475 111 ntBASIC4.32□□□□□ -1.72
HOXA11P31270 RNU6-77P-201ENST00000410554 91 ntBASIC4.32□□□□□ -1.72
HOXA11P31270 RNU2-6P-201ENST00000411404 190 ntBASIC4.32□□□□□ -1.72
HOXA11P31270 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXA11P31270 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXA11P31270 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXA11P31270 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.32□□□□□ -1.72
HOXA11P31270 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXA11P31270 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXA11P31270 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.32□□□□□ -1.72
HOXA11P31270 AC007389.2-201ENST00000434630 306 ntBASIC4.32□□□□□ -1.72
HOXA11P31270 AL500522.2-201ENST00000448562 343 ntBASIC4.32□□□□□ -1.72
HOXA11P31270 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXA11P31270 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXA11P31270 RPL21P71-201ENST00000465598 459 ntBASIC4.32□□□□□ -1.72
HOXA11P31270 RPS26P28-201ENST00000470806 348 ntBASIC4.32□□□□□ -1.72
HOXA11P31270 RPL7P18-201ENST00000478965 734 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms