Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC092045.1-201ENST00000495716 1231 ntBASIC4.1□□□□□ -1.75
CLIP1P30622 AC008565.1-201ENST00000509046 885 ntBASIC4.1□□□□□ -1.75
CLIP1P30622 AC128657.1-201ENST00000549459 145 ntBASIC4.1□□□□□ -1.75
CLIP1P30622 AC007621.1-201ENST00000604544 437 ntBASIC4.1□□□□□ -1.75
CLIP1P30622 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLIP1P30622 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
CLIP1P30622 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CLIP1P30622 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLIP1P30622 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.09□□□□□ -1.75
CLIP1P30622 SMC4P1-201ENST00000414479 527 ntBASIC4.09□□□□□ -1.75
CLIP1P30622 AC080125.1-201ENST00000414888 684 ntBASIC4.09□□□□□ -1.75
CLIP1P30622 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.09□□□□□ -1.75
CLIP1P30622 EIF2S2P4-201ENST00000461070 984 ntBASIC4.09□□□□□ -1.75
CLIP1P30622 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.09□□□□□ -1.75
CLIP1P30622 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC4.09□□□□□ -1.75
CLIP1P30622 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.09□□□□□ -1.75
CLIP1P30622 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
CLIP1P30622 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CLIP1P30622 ZNF658B-202ENST00000615961 3375 ntBASIC4.08□□□□□ -1.76
CLIP1P30622 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.08□□□□□ -1.76
CLIP1P30622 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.08□□□□□ -1.76
CLIP1P30622 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLIP1P30622 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLIP1P30622 RNU1-100P-201ENST00000365255 165 ntBASIC4.08□□□□□ -1.76
CLIP1P30622 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CLIP1P30622 AC078785.3-201ENST00000476607 425 ntBASIC4.08□□□□□ -1.76
CLIP1P30622 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.08□□□□□ -1.76
CLIP1P30622 RPL7L1P13-201ENST00000511702 739 ntBASIC4.08□□□□□ -1.76
CLIP1P30622 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.08□□□□□ -1.76
CLIP1P30622 AP003122.3-201ENST00000526316 255 ntBASIC4.08□□□□□ -1.76
CLIP1P30622 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.08□□□□□ -1.76
CLIP1P30622 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.08□□□□□ -1.76
CLIP1P30622 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC4.08□□□□□ -1.76
CLIP1P30622 AC025034.2-201ENST00000623264 286 ntBASIC4.08□□□□□ -1.76
CLIP1P30622 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLIP1P30622 AC095050.2-201ENST00000510748 1458 ntBASIC4.08□□□□□ -1.76
CLIP1P30622 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLIP1P30622 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLIP1P30622 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CLIP1P30622 SNORA51.4-201ENST00000364993 124 ntBASIC4.07□□□□□ -1.76
CLIP1P30622 RN7SKP192-201ENST00000411291 327 ntBASIC4.07□□□□□ -1.76
CLIP1P30622 RPL23AP74-201ENST00000437246 471 ntBASIC4.07□□□□□ -1.76
CLIP1P30622 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.07□□□□□ -1.76
CLIP1P30622 RNU7-170P-201ENST00000459303 61 ntBASIC4.07□□□□□ -1.76
CLIP1P30622 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.07□□□□□ -1.76
CLIP1P30622 ANXA2P1-201ENST00000505539 926 ntBASIC4.07□□□□□ -1.76
CLIP1P30622 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC4.07□□□□□ -1.76
CLIP1P30622 WARS-244ENST00000627608 123 ntTSL 5 BASIC4.07□□□□□ -1.76
CLIP1P30622 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CLIP1P30622 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLIP1P30622 ZNF542P-204ENST00000482727 1305 ntBASIC4.06□□□□□ -1.76
CLIP1P30622 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.06□□□□□ -1.76
CLIP1P30622 FCF1P1-201ENST00000432690 571 ntBASIC4.06□□□□□ -1.76
CLIP1P30622 AC009969.1-201ENST00000438726 172 ntBASIC4.06□□□□□ -1.76
CLIP1P30622 RN7SKP283-201ENST00000517197 270 ntBASIC4.06□□□□□ -1.76
CLIP1P30622 RPL7P20-201ENST00000520308 745 ntBASIC4.06□□□□□ -1.76
CLIP1P30622 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLIP1P30622 AC123904.3-201ENST00000547218 814 ntBASIC4.06□□□□□ -1.76
CLIP1P30622 AL389895.1-201ENST00000554127 252 ntBASIC4.06□□□□□ -1.76
CLIP1P30622 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.06□□□□□ -1.76
CLIP1P30622 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.06□□□□□ -1.76
CLIP1P30622 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLIP1P30622 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.06□□□□□ -1.76
CLIP1P30622 HDX-206ENST00000506585 6158 ntTSL 2 BASIC4.06□□□□□ -1.76
CLIP1P30622 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.06□□□□□ -1.76
CLIP1P30622 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CLIP1P30622 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CLIP1P30622 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CLIP1P30622 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CLIP1P30622 MIR27B-201ENST00000385129 97 ntBASIC4.05□□□□□ -1.76
CLIP1P30622 SNORA3.2-201ENST00000408221 125 ntBASIC4.05□□□□□ -1.76
CLIP1P30622 RNU2-6P-201ENST00000411404 190 ntBASIC4.05□□□□□ -1.76
CLIP1P30622 AL391156.1-201ENST00000554965 554 ntBASIC4.05□□□□□ -1.76
CLIP1P30622 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.05□□□□□ -1.76
CLIP1P30622 RN7SL371P-201ENST00000578099 267 ntBASIC4.05□□□□□ -1.76
CLIP1P30622 SNORD53-201ENST00000579969 78 ntBASIC4.05□□□□□ -1.76
CLIP1P30622 AC069234.5-201ENST00000611056 416 ntBASIC4.05□□□□□ -1.76
CLIP1P30622 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CLIP1P30622 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLIP1P30622 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLIP1P30622 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CLIP1P30622 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CLIP1P30622 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.05□□□□□ -1.76
CLIP1P30622 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CLIP1P30622 AC069218.2-201ENST00000411665 344 ntBASIC4.04□□□□□ -1.76
CLIP1P30622 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.04□□□□□ -1.76
CLIP1P30622 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CLIP1P30622 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
CLIP1P30622 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.04□□□□□ -1.76
CLIP1P30622 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.04□□□□□ -1.76
CLIP1P30622 OR6K1P-201ENST00000456766 971 ntBASIC4.04□□□□□ -1.76
CLIP1P30622 OR9N1P-201ENST00000491296 333 ntBASIC4.04□□□□□ -1.76
CLIP1P30622 RN7SKP24-201ENST00000515888 284 ntBASIC4.04□□□□□ -1.76
CLIP1P30622 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.04□□□□□ -1.76
CLIP1P30622 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.04□□□□□ -1.76
CLIP1P30622 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.04□□□□□ -1.76
CLIP1P30622 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.04□□□□□ -1.76
CLIP1P30622 AC010620.2-201ENST00000600135 313 ntBASIC4.04□□□□□ -1.76
CLIP1P30622 AC087565.3-202ENST00000642085 1603 ntBASIC4.04□□□□□ -1.76
CLIP1P30622 CDC27P2-201ENST00000425026 1922 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms