Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.5□□□□□ -1.85
XRCC1P18887 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.5□□□□□ -1.85
XRCC1P18887 AL732372.2-225ENST00000642124 456 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
XRCC1P18887 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
XRCC1P18887 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
XRCC1P18887 MFSD8-236ENST00000641509 4050 ntBASIC3.49□□□□□ -1.85
XRCC1P18887 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
XRCC1P18887 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
XRCC1P18887 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
XRCC1P18887 AC058791.1-201ENST00000608412 3198 ntBASIC3.49□□□□□ -1.85
XRCC1P18887 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.49□□□□□ -1.85
XRCC1P18887 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
XRCC1P18887 RNU6-619P-201ENST00000365146 108 ntBASIC3.49□□□□□ -1.85
XRCC1P18887 MIR183-201ENST00000384958 110 ntBASIC3.49□□□□□ -1.85
XRCC1P18887 AC069282.1-201ENST00000411911 526 ntBASIC3.49□□□□□ -1.85
XRCC1P18887 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.49□□□□□ -1.85
XRCC1P18887 SDCBPP2-201ENST00000424643 885 ntBASIC3.49□□□□□ -1.85
XRCC1P18887 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.49□□□□□ -1.85
XRCC1P18887 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.49□□□□□ -1.85
XRCC1P18887 AC073063.1-201ENST00000434352 607 ntBASIC3.49□□□□□ -1.85
XRCC1P18887 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.49□□□□□ -1.85
XRCC1P18887 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.49□□□□□ -1.85
XRCC1P18887 AL138799.3-201ENST00000438968 350 ntBASIC3.49□□□□□ -1.85
XRCC1P18887 RPL23AP33-201ENST00000442301 452 ntBASIC3.49□□□□□ -1.85
XRCC1P18887 HMGB3P8-201ENST00000449709 577 ntBASIC3.49□□□□□ -1.85
XRCC1P18887 RBMY2UP-201ENST00000453474 324 ntBASIC3.49□□□□□ -1.85
XRCC1P18887 RPS4XP2-201ENST00000458402 793 ntBASIC3.49□□□□□ -1.85
XRCC1P18887 RPL6P9-201ENST00000466502 859 ntBASIC3.49□□□□□ -1.85
XRCC1P18887 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.49□□□□□ -1.85
XRCC1P18887 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.49□□□□□ -1.85
XRCC1P18887 MTCO1P30-201ENST00000515244 580 ntBASIC3.49□□□□□ -1.85
XRCC1P18887 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.49□□□□□ -1.85
XRCC1P18887 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.49□□□□□ -1.85
XRCC1P18887 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.49□□□□□ -1.85
XRCC1P18887 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
XRCC1P18887 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.49□□□□□ -1.85
XRCC1P18887 PDCL2P2-201ENST00000533651 189 ntBASIC3.49□□□□□ -1.85
XRCC1P18887 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.49□□□□□ -1.85
XRCC1P18887 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.49□□□□□ -1.85
XRCC1P18887 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.49□□□□□ -1.85
XRCC1P18887 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.49□□□□□ -1.85
XRCC1P18887 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.49□□□□□ -1.85
XRCC1P18887 MIR3186-201ENST00000577404 85 ntBASIC3.49□□□□□ -1.85
XRCC1P18887 AC068620.3-201ENST00000602749 560 ntBASIC3.49□□□□□ -1.85
XRCC1P18887 AC006077.1-201ENST00000604746 343 ntBASIC3.49□□□□□ -1.85
XRCC1P18887 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.49□□□□□ -1.85
XRCC1P18887 AC069200.1-201ENST00000609511 323 ntBASIC3.49□□□□□ -1.85
XRCC1P18887 AC124016.2-201ENST00000610058 665 ntBASIC3.49□□□□□ -1.85
XRCC1P18887 AC244100.1-202ENST00000621554 382 ntBASIC3.49□□□□□ -1.85
XRCC1P18887 AP003355.3-201ENST00000623465 114 ntBASIC3.49□□□□□ -1.85
XRCC1P18887 AC004777.1-201ENST00000624317 287 ntBASIC3.49□□□□□ -1.85
XRCC1P18887 AL392088.2-201ENST00000637607 285 ntBASIC3.49□□□□□ -1.85
XRCC1P18887 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
XRCC1P18887 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
XRCC1P18887 GABPAP-201ENST00000419271 1356 ntBASIC3.49□□□□□ -1.85
XRCC1P18887 MTND5P3-201ENST00000438536 1800 ntBASIC3.49□□□□□ -1.85
XRCC1P18887 AC007656.2-201ENST00000624902 4547 ntBASIC3.49□□□□□ -1.85
XRCC1P18887 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.48□□□□□ -1.85
XRCC1P18887 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
XRCC1P18887 RNU2-37P-201ENST00000410695 177 ntBASIC3.48□□□□□ -1.85
XRCC1P18887 RPS7P15-201ENST00000415804 584 ntBASIC3.48□□□□□ -1.85
XRCC1P18887 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.48□□□□□ -1.85
XRCC1P18887 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.48□□□□□ -1.85
XRCC1P18887 OR51AB1P-201ENST00000429046 620 ntBASIC3.48□□□□□ -1.85
XRCC1P18887 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.48□□□□□ -1.85
XRCC1P18887 MTCYBP15-201ENST00000433123 1127 ntBASIC3.48□□□□□ -1.85
XRCC1P18887 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.48□□□□□ -1.85
XRCC1P18887 PRDX3P3-201ENST00000447765 522 ntBASIC3.48□□□□□ -1.85
XRCC1P18887 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.48□□□□□ -1.85
XRCC1P18887 HMGN1P5-201ENST00000448591 263 ntBASIC3.48□□□□□ -1.85
XRCC1P18887 AC006539.3-201ENST00000454258 129 ntBASIC3.48□□□□□ -1.85
XRCC1P18887 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.48□□□□□ -1.85
XRCC1P18887 RNF138P1-201ENST00000502765 546 ntBASIC3.48□□□□□ -1.85
XRCC1P18887 AC091860.1-201ENST00000505723 432 ntBASIC3.48□□□□□ -1.85
XRCC1P18887 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.48□□□□□ -1.85
XRCC1P18887 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.48□□□□□ -1.85
XRCC1P18887 AC093755.1-201ENST00000512950 1023 ntBASIC3.48□□□□□ -1.85
XRCC1P18887 AC016065.2-201ENST00000514530 444 ntBASIC3.48□□□□□ -1.85
XRCC1P18887 AC112206.4-201ENST00000515142 405 ntBASIC3.48□□□□□ -1.85
XRCC1P18887 AP001207.1-201ENST00000524051 481 ntBASIC3.48□□□□□ -1.85
XRCC1P18887 AP000926.4-201ENST00000527351 454 ntBASIC3.48□□□□□ -1.85
XRCC1P18887 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.48□□□□□ -1.85
XRCC1P18887 OR6C73P-201ENST00000546432 358 ntBASIC3.48□□□□□ -1.85
XRCC1P18887 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.48□□□□□ -1.85
XRCC1P18887 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.48□□□□□ -1.85
XRCC1P18887 AC006270.2-201ENST00000578523 652 ntBASIC3.48□□□□□ -1.85
XRCC1P18887 BNIP3P22-201ENST00000593399 556 ntBASIC3.48□□□□□ -1.85
XRCC1P18887 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.48□□□□□ -1.85
XRCC1P18887 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.48□□□□□ -1.85
XRCC1P18887 AC022149.2-201ENST00000621061 203 ntBASIC3.48□□□□□ -1.85
XRCC1P18887 AC007275.1-201ENST00000621243 671 ntBASIC3.48□□□□□ -1.85
XRCC1P18887 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.48□□□□□ -1.85
XRCC1P18887 AC006065.5-201ENST00000623427 349 ntBASIC3.48□□□□□ -1.85
XRCC1P18887 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
XRCC1P18887 AC138649.5-201ENST00000637456 137 ntBASIC3.48□□□□□ -1.85
XRCC1P18887 AC139713.2-210ENST00000641741 992 ntBASIC3.48□□□□□ -1.85
XRCC1P18887 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
XRCC1P18887 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.48□□□□□ -1.85
XRCC1P18887 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms