Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5□□□□□ -1.61
ATF4P18848 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5□□□□□ -1.61
ATF4P18848 LAPTM4BP2-201ENST00000604542 446 ntBASIC5□□□□□ -1.61
ATF4P18848 AC009248.2-201ENST00000619826 254 ntBASIC5□□□□□ -1.61
ATF4P18848 AP001264.1-201ENST00000620602 703 ntBASIC5□□□□□ -1.61
ATF4P18848 AL136221.1-201ENST00000621449 509 ntBASIC5□□□□□ -1.61
ATF4P18848 AC006328.2-201ENST00000623198 397 ntBASIC5□□□□□ -1.61
ATF4P18848 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5□□□□□ -1.61
ATF4P18848 AC012005.2-201ENST00000624333 397 ntBASIC5□□□□□ -1.61
ATF4P18848 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5□□□□□ -1.61
ATF4P18848 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5□□□□□ -1.61
ATF4P18848 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
ATF4P18848 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5□□□□□ -1.61
ATF4P18848 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
ATF4P18848 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
ATF4P18848 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ATF4P18848 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
ATF4P18848 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
ATF4P18848 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.99□□□□□ -1.61
ATF4P18848 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
ATF4P18848 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.99□□□□□ -1.61
ATF4P18848 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ATF4P18848 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ATF4P18848 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
ATF4P18848 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ATF4P18848 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.99□□□□□ -1.61
ATF4P18848 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
ATF4P18848 RNU1-5P-201ENST00000362684 144 ntBASIC4.99□□□□□ -1.61
ATF4P18848 RNU5A-1-201ENST00000362698 116 ntBASIC4.99□□□□□ -1.61
ATF4P18848 RN7SKP130-201ENST00000364924 301 ntBASIC4.99□□□□□ -1.61
ATF4P18848 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
ATF4P18848 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC4.99□□□□□ -1.61
ATF4P18848 AL353133.1-201ENST00000407695 401 ntBASIC4.99□□□□□ -1.61
ATF4P18848 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.99□□□□□ -1.61
ATF4P18848 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.99□□□□□ -1.61
ATF4P18848 CYP4F30P-202ENST00000420048 405 ntBASIC4.99□□□□□ -1.61
ATF4P18848 MTCO3P46-201ENST00000425787 232 ntBASIC4.99□□□□□ -1.61
ATF4P18848 RWDD4P2-201ENST00000426392 563 ntBASIC4.99□□□□□ -1.61
ATF4P18848 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.99□□□□□ -1.61
ATF4P18848 AC126120.1-201ENST00000431082 470 ntBASIC4.99□□□□□ -1.61
ATF4P18848 HMGB1P27-201ENST00000431429 603 ntBASIC4.99□□□□□ -1.61
ATF4P18848 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC4.99□□□□□ -1.61
ATF4P18848 RPL26P6-201ENST00000440913 438 ntBASIC4.99□□□□□ -1.61
ATF4P18848 AC020550.1-201ENST00000447385 163 ntBASIC4.99□□□□□ -1.61
ATF4P18848 AC090804.1-201ENST00000448870 490 ntBASIC4.99□□□□□ -1.61
ATF4P18848 HMGB3P30-201ENST00000457863 606 ntBASIC4.99□□□□□ -1.61
ATF4P18848 RNU7-180P-201ENST00000459240 63 ntBASIC4.99□□□□□ -1.61
ATF4P18848 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC4.99□□□□□ -1.61
ATF4P18848 AC021660.1-201ENST00000465006 554 ntBASIC4.99□□□□□ -1.61
ATF4P18848 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC4.99□□□□□ -1.61
ATF4P18848 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.99□□□□□ -1.61
ATF4P18848 AC106872.2-201ENST00000494303 480 ntBASIC4.99□□□□□ -1.61
ATF4P18848 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC4.99□□□□□ -1.61
ATF4P18848 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ATF4P18848 AC010350.1-201ENST00000504908 231 ntBASIC4.99□□□□□ -1.61
ATF4P18848 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC4.99□□□□□ -1.61
ATF4P18848 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.99□□□□□ -1.61
ATF4P18848 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC4.99□□□□□ -1.61
ATF4P18848 RN7SKP258-201ENST00000517151 304 ntBASIC4.99□□□□□ -1.61
ATF4P18848 IGLV3-24-201ENST00000517477 197 ntBASIC4.99□□□□□ -1.61
ATF4P18848 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC4.99□□□□□ -1.61
ATF4P18848 AP006587.4-201ENST00000526053 529 ntBASIC4.99□□□□□ -1.61
ATF4P18848 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.99□□□□□ -1.61
ATF4P18848 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
ATF4P18848 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC4.99□□□□□ -1.61
ATF4P18848 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC4.99□□□□□ -1.61
ATF4P18848 AL355836.1-201ENST00000555951 870 ntBASIC4.99□□□□□ -1.61
ATF4P18848 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
ATF4P18848 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.99□□□□□ -1.61
ATF4P18848 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC4.99□□□□□ -1.61
ATF4P18848 AC245052.7-201ENST00000601161 359 ntBASIC4.99□□□□□ -1.61
ATF4P18848 AL138889.2-201ENST00000603883 242 ntBASIC4.99□□□□□ -1.61
ATF4P18848 AL670379.4-201ENST00000605279 254 ntBASIC4.99□□□□□ -1.61
ATF4P18848 AL158032.1-201ENST00000605401 106 ntBASIC4.99□□□□□ -1.61
ATF4P18848 AC087045.1-201ENST00000605856 382 ntBASIC4.99□□□□□ -1.61
ATF4P18848 AL365204.3-201ENST00000612448 685 ntBASIC4.99□□□□□ -1.61
ATF4P18848 AC012409.4-201ENST00000612923 249 ntBASIC4.99□□□□□ -1.61
ATF4P18848 AL390240.1-201ENST00000612950 384 ntBASIC4.99□□□□□ -1.61
ATF4P18848 AL359547.2-201ENST00000615810 418 ntBASIC4.99□□□□□ -1.61
ATF4P18848 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
ATF4P18848 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC4.99□□□□□ -1.61
ATF4P18848 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC4.99□□□□□ -1.61
ATF4P18848 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
ATF4P18848 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
ATF4P18848 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ATF4P18848 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
ATF4P18848 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ATF4P18848 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ATF4P18848 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
ATF4P18848 SDAD1P2-201ENST00000441308 2028 ntBASIC4.99□□□□□ -1.61
ATF4P18848 AC011755.1-201ENST00000623763 2049 ntBASIC4.99□□□□□ -1.61
ATF4P18848 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
ATF4P18848 SMG1P5-202ENST00000529428 4219 ntBASIC4.99□□□□□ -1.61
ATF4P18848 SMG1P2-201ENST00000566127 4221 ntBASIC4.99□□□□□ -1.61
ATF4P18848 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ATF4P18848 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC4.99□□□□□ -1.61
ATF4P18848 AC099654.2-201ENST00000433031 1980 ntBASIC4.98□□□□□ -1.61
ATF4P18848 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.98□□□□□ -1.61
ATF4P18848 AC000123.3-201ENST00000624029 4975 ntBASIC4.98□□□□□ -1.61
ATF4P18848 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms